BO24215.complete Sequence
553 bp assembled on 2010-05-05
GenBank Submission: KX794342
> BO24215.complete
GAAGTTATCAGTCGACATGAAGTGGACAACGGGTCTGCTCTTGGCGGTGG
CCATGCTCAGCCTGCCATCTCGGGGAGATTCATCCCGAAATCTCACGGAA
TTCATGGGACATCGACAGAAGCGCTGGCTGATCTACCAGAATAGTGGGTC
TTTGAAGTTTAGTATTGGTCCCTCGATGCCCATACCCTTGGGGGACAAGG
TGACCTTCCGTTCCTGTGTGCTCTCCTACACGCTCCAAGGTGGTTCCTAT
TCCCTGCCCACATCACCCATCTGGCCGTGGGATAAGTGGGAAGGCACCTT
CGCTCGTTCCTTGATGCAAATGCGAAGGAATATTGAGCGCCATGTGGCCA
ATGGCGGAGTGCGATATGCGGACGATGCCAGGCTCTTGGTCTACACTGCA
CTGGAGGAGTATATGGGCAGGAGGAACAATGACCGCTCCATGGGCAGACA
ATGTCTGCTGCGCTCCATATGCGAGAATGCTCAGATCCATCATCATATCG
GTGTGTTCTCGGAAATTATGGATATTGTACTCAGGGCAAGCTTTCTAGAC
CAT
BO24215.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-RC | 660 | CG14826-PC | 1..518 | 17..534 | 2590 | 100 | Plus |
| CG14826-RA | 660 | CG14826-PA | 1..518 | 17..534 | 2590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-RC | 1074 | CG14826-RC | 21..539 | 16..534 | 2595 | 100 | Plus |
| CG14826-RA | 1022 | CG14826-RA | 272..790 | 16..534 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7234783..7235302 | 16..535 | 2600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:23:36 has no hits.
BO24215.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:22 Download gff for
BO24215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RB | 273..791 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:16 Download gff for
BO24215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RA | 273..792 | 17..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:18 Download gff for
BO24215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14826-RA | 273..792 | 17..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:18 Download gff for
BO24215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7234784..7235302 | 17..537 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:16 Download gff for
BO24215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7227884..7228402 | 17..537 | 99 | | Plus |
BO24215.pep Sequence
Translation from 16 to 553
> BO24215.pep
MKWTTGLLLAVAMLSLPSRGDSSRNLTEFMGHRQKRWLIYQNSGSLKFSI
GPSMPIPLGDKVTFRSCVLSYTLQGGSYSLPTSPIWPWDKWEGTFARSLM
QMRRNIERHVANGGVRYADDARLLVYTALEEYMGRRNNDRSMGRQCLLRS
ICENAQIHHHIGVFSEIMDIVLRASFLDH
BO24215.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14826-PC | 219 | CG14826-PC | 1..172 | 1..172 | 914 | 100 | Plus |
| CG14826-PA | 219 | CG14826-PA | 1..172 | 1..172 | 914 | 100 | Plus |
| CG14829-PB | 219 | CG14829-PB | 30..172 | 24..172 | 361 | 44.7 | Plus |
| CG13869-PA | 215 | CG13869-PA | 23..165 | 25..173 | 184 | 31.6 | Plus |
| CG17784-PA | 237 | CG17784-PA | 47..189 | 21..172 | 141 | 32.5 | Plus |
