Clone BO24267 Report

Search the DGRC for BO24267

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:242
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG14079-RA
Protein status:BO24267.pep: Imported from assembly
Sequenced Size:841

Clone Sequence Records

BO24267.complete Sequence

841 bp assembled on 2010-05-05

GenBank Submission: KX798980

> BO24267.complete
GAAGTTATCAGTCGACATGTCCCACAAGAGATTCTACGTAAAGTTAGATC
TGCAGCTCCATGCGCTCACTTGTCCCGGTGTTTGGCTTTGTTCACACGGA
TATTTGGAGGCCACCATCAAGACCTTGGGCTACTACTTTCGAACTGGACC
CATGGAGCCTCGCTTTCCGATGCTGTGCCACGATCAGTTCACGATGGAGG
GATACTTCAAGAGCGTGGGCTGCCTGGAGGAGATGCACGAGCTACTGAAA
GCTGAACAGCTGGAGATAACCGTCTGGCAGAATGGCCGAAGGTTGGCCTA
CTTCGTGGGCAGTCTTTCGGATGTGATGCAACCCACTTTTCCGCGCCTGA
GCTGTGCCCACAGCTCCAATGTTCAGCTGTTGATGAAGGCGACGCCTGCT
TTTCCGGGTATCCTGGCGCCCAAGGTGGAGCTATCTGCGCAGTTGACCAC
GCAGGATCGGAAAAAGGTGTGCAGCTGCTCCAGTTCCAGGGAGTACTCTG
CTCCTCCTGTCAATCGCCACGTTGAGAGCCGTTGCCTGGGCCATTTGGAT
CAGCCTCGAAAGCAGCAAACCGTGTGTCATGGGAGGCAATCCAATTGTTG
TCCAAGTGGCAGTTACGCCGCTTGGAGAGCTGGCTCTCCTGCCCAACAGA
AACAGCAGGAACGGCGATTGTCCTCCTGCTCCAGCACAACGCAATTAAGT
AGCCTTAGCCAGAGTTCCTCGCTGACGCAGTGCAGCCACTTGTCCAGCTG
TAGTTCTCCTTTGGATGAGCATCACAACAGCTGCGATATATGCCAGGCCT
ACAGGCGCATGTTTCCTTCTTACGCAAGCTTTCTAGACCAT

BO24267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-RA 810 CG14079-PA 1..807 17..823 4035 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-RA 1008 CG14079-RA 165..971 17..823 4035 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19098268..19099027 64..823 3800 100 Plus
3L 28110227 3L 19098163..19098210 17..64 240 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:22:17 has no hits.

BO24267.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:08 Download gff for BO24267.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 1..807 17..825 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:43 Download gff for BO24267.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 165..971 17..825 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:48 Download gff for BO24267.complete
Subject Subject Range Query Range Percent Splice Strand
CG14079-RA 165..971 17..825 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:48 Download gff for BO24267.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19098163..19098210 17..64 100 -> Plus
3L 19098269..19099027 65..825 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:43 Download gff for BO24267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19091263..19091310 17..64 100 -> Plus
arm_3L 19091369..19092127 65..825 99   Plus

BO24267.pep Sequence

Translation from 16 to 841

> BO24267.pep
MSHKRFYVKLDLQLHALTCPGVWLCSHGYLEATIKTLGYYFRTGPMEPRF
PMLCHDQFTMEGYFKSVGCLEEMHELLKAEQLEITVWQNGRRLAYFVGSL
SDVMQPTFPRLSCAHSSNVQLLMKATPAFPGILAPKVELSAQLTTQDRKK
VCSCSSSREYSAPPVNRHVESRCLGHLDQPRKQQTVCHGRQSNCCPSGSY
AAWRAGSPAQQKQQERRLSSCSSTTQLSSLSQSSSLTQCSHLSSCSSPLD
EHHNSCDICQAYRRMFPSYASFLDH

BO24267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14079-PA 269 CG14079-PA 1..269 1..269 1454 100 Plus