BO24267.complete Sequence
841 bp assembled on 2010-05-05
GenBank Submission: KX798980
> BO24267.complete
GAAGTTATCAGTCGACATGTCCCACAAGAGATTCTACGTAAAGTTAGATC
TGCAGCTCCATGCGCTCACTTGTCCCGGTGTTTGGCTTTGTTCACACGGA
TATTTGGAGGCCACCATCAAGACCTTGGGCTACTACTTTCGAACTGGACC
CATGGAGCCTCGCTTTCCGATGCTGTGCCACGATCAGTTCACGATGGAGG
GATACTTCAAGAGCGTGGGCTGCCTGGAGGAGATGCACGAGCTACTGAAA
GCTGAACAGCTGGAGATAACCGTCTGGCAGAATGGCCGAAGGTTGGCCTA
CTTCGTGGGCAGTCTTTCGGATGTGATGCAACCCACTTTTCCGCGCCTGA
GCTGTGCCCACAGCTCCAATGTTCAGCTGTTGATGAAGGCGACGCCTGCT
TTTCCGGGTATCCTGGCGCCCAAGGTGGAGCTATCTGCGCAGTTGACCAC
GCAGGATCGGAAAAAGGTGTGCAGCTGCTCCAGTTCCAGGGAGTACTCTG
CTCCTCCTGTCAATCGCCACGTTGAGAGCCGTTGCCTGGGCCATTTGGAT
CAGCCTCGAAAGCAGCAAACCGTGTGTCATGGGAGGCAATCCAATTGTTG
TCCAAGTGGCAGTTACGCCGCTTGGAGAGCTGGCTCTCCTGCCCAACAGA
AACAGCAGGAACGGCGATTGTCCTCCTGCTCCAGCACAACGCAATTAAGT
AGCCTTAGCCAGAGTTCCTCGCTGACGCAGTGCAGCCACTTGTCCAGCTG
TAGTTCTCCTTTGGATGAGCATCACAACAGCTGCGATATATGCCAGGCCT
ACAGGCGCATGTTTCCTTCTTACGCAAGCTTTCTAGACCAT
BO24267.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14079-RA | 810 | CG14079-PA | 1..807 | 17..823 | 4035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14079-RA | 1008 | CG14079-RA | 165..971 | 17..823 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19098268..19099027 | 64..823 | 3800 | 100 | Plus |
3L | 28110227 | 3L | 19098163..19098210 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:22:17 has no hits.
BO24267.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:08 Download gff for
BO24267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14079-RA | 1..807 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:43 Download gff for
BO24267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14079-RA | 165..971 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:48 Download gff for
BO24267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14079-RA | 165..971 | 17..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:48 Download gff for
BO24267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19098163..19098210 | 17..64 | 100 | -> | Plus |
3L | 19098269..19099027 | 65..825 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:43 Download gff for
BO24267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19091263..19091310 | 17..64 | 100 | -> | Plus |
arm_3L | 19091369..19092127 | 65..825 | 99 | | Plus |
BO24267.pep Sequence
Translation from 16 to 841
> BO24267.pep
MSHKRFYVKLDLQLHALTCPGVWLCSHGYLEATIKTLGYYFRTGPMEPRF
PMLCHDQFTMEGYFKSVGCLEEMHELLKAEQLEITVWQNGRRLAYFVGSL
SDVMQPTFPRLSCAHSSNVQLLMKATPAFPGILAPKVELSAQLTTQDRKK
VCSCSSSREYSAPPVNRHVESRCLGHLDQPRKQQTVCHGRQSNCCPSGSY
AAWRAGSPAQQKQQERRLSSCSSTTQLSSLSQSSSLTQCSHLSSCSSPLD
EHHNSCDICQAYRRMFPSYASFLDH
BO24267.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14079-PA | 269 | CG14079-PA | 1..269 | 1..269 | 1454 | 100 | Plus |