BO24273.complete Sequence
547 bp assembled on 2010-05-05
> BO24273.complete
GAAGTTATCAGTCGACATGACCATTCTACTTCGTACTCCCAGAGCGGTGG
AGCTTTGGAAGTGGAGTAATGGCAATTACTCTCTATCAAGCAGGCTGATA
GATGGGCAGGTGGAGCAAATGGCTCTTAGTCAAGGAGGTGCTGGCATAGA
GAGCGGATATGTGGCGCTGATGGCTTCATCGCCAGCAGCAGAGATTCGGA
TTTACAGCTTCGGCAGCCCAGACACGAGCAGCTTCCAACTGGACCAAGTC
CTGGAGCTCGAGGACTCCCAACAGTCGCGGGTAATGCGCTTTATGCACCT
GCCCGAGTCCGACGATCTACTGCTCTGTGTGTCCAACGTACTGCCGCAGC
AACCGCTTCGCATCTACCAGCACCGCGGAGCAGCGGGATTCCAGCAAATC
CTCGGCGACAGCGCCTTGCCAAAGGCTCATGCCCTGGAGGTGCTCTATCT
GCCCAGCCATAAGCTGCGACTGCTGTCCATGGCCACGGAGGAGTCGGTCT
ACTTGCTGCAGCCACAGTTTACTACACTTGCAAGCTTTCTAGACCAT
BO24273.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
clos-RD | 5511 | CG42600-PD | 4996..5508 | 17..529 | 2565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
clos-RD | 5621 | CG42600-RD | 5053..5565 | 17..529 | 2565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9588009..9588337 | 529..201 | 1630 | 99.7 | Minus |
2R | 25286936 | 2R | 9588391..9588581 | 207..17 | 955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:22:26 has no hits.
BO24273.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:10 Download gff for
BO24273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12928-RB | 225..737 | 17..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:47 Download gff for
BO24273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
clos-RD | 5053..5565 | 17..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:51 Download gff for
BO24273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
clos-RD | 5053..5565 | 17..531 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:51 Download gff for
BO24273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9588007..9588330 | 208..531 | 99 | <- | Minus |
2R | 9588391..9588581 | 17..207 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:47 Download gff for
BO24273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5475512..5475835 | 208..531 | 99 | <- | Minus |
arm_2R | 5475896..5476086 | 17..207 | 100 | | Minus |
BO24273.pep Sequence
Translation from 16 to 547
> BO24273.pep
MTILLRTPRAVELWKWSNGNYSLSSRLIDGQVEQMALSQGGAGIESGYVA
LMASSPAAEIRIYSFGSPDTSSFQLDQVLELEDSQQSRVMRFMHLPESDD
LLLCVSNVLPQQPLRIYQHRGAAGFQQILGDSALPKAHALEVLYLPSHKL
RLLSMATEESVYLLQPQFTTLASFLDH
BO24273.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
clos-PD | 1836 | CG42600-PD | 1666..1836 | 1..171 | 862 | 100 | Plus |