Clone BO24277 Report

Search the DGRC for BO24277

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:242
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG14258-RA
Protein status:BO24277.pep: Imported from assembly
Sequenced Size:808

Clone Sequence Records

BO24277.complete Sequence

808 bp assembled on 2010-05-05

GenBank Submission: KX799805

> BO24277.complete
GAAGTTATCAGTCGACATGCTTATTAAAGTTGCCAAGTTCCTGAGTATTG
TAGCCGTACTCCTTTCAGCAGTCGAAGGAGCTAAATATCTGGCAGAGAAA
CCCGACTTCCTAATCCCATGTATCGTGGGCGATCCCAACTTTAATGTCTG
TCTGACCAAAAACTTCCAGAGTTTCTTCCGTCAGTGGAAGGACGGAATTC
CCGGCTACAATGCCGTGGGATCCTTTGATCCTTTTTACATCAAGAGAGTG
AAATTTACCCAGGATGCCAGCAGGTCTATAGCTATCAATGCCGATCTGAA
GGAAGTCTATGTAGCAGGTGCTGGTCAAGCATTAGTCTTGGAATCCAGCT
GGGATCCAAATCACTATGTAGCCAGGACTTTGATTTCCGTGCCCAAGTTG
CGTTTCAATTTCGATTACAAAGTCAAAGGACACGTCTCAGCGCTGAATCT
CAATGGTCATGGCAAGGGATACTTCGAAGCTGAAAATGCTCTGTTATTGT
TGGAATTGGCTGTCAAACCGCTGGCCACCTCAGATGGTTATTTCGCTGAT
GTGCAAAGTGTAAAGGTAAATTTCCGCGAGATCAAGCAATTCCGCATCAA
GCTGGAAAATCTCTTTGGCGGCAACAAGGATCTGGAGGATACTGCACACA
TTTTGTTCAACGAAAACTGGCGCGACTTCTTTGAGGTACTGCGTCCGGCG
GTGGAGCAAACAGTTGGCGGAGTGCTTTTGGATCGGTTCAAGAAGACCTT
TGTCTATGTACCAGCTACCTATTTGATTAAAGACTTTCACGCAAGCTTTC
TAGACCAT

BO24277.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14258-RA 777 CG14258-PA 1..774 17..790 3870 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14258-RA 901 CG14258-RA 37..810 17..790 3870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27093825..27094133 482..790 1545 100 Plus
3R 32079331 3R 27093335..27093581 102..348 1235 100 Plus
3R 32079331 3R 27093633..27093769 346..482 685 100 Plus
3R 32079331 3R 27093179..27093263 17..101 425 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:29:21 has no hits.

BO24277.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 12:07:38 Download gff for BO24277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14258-RA 1..774 17..792 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:43 Download gff for BO24277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14258-RA 37..810 17..792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:20 Download gff for BO24277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14258-RA 37..810 17..792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:20 Download gff for BO24277.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27093826..27094133 483..792 99   Plus
3R 27093179..27093263 17..101 100 -> Plus
3R 27093335..27093581 102..348 100 -> Plus
3R 27093636..27093769 349..482 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:43 Download gff for BO24277.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22919548..22919855 483..792 99   Plus
arm_3R 22918901..22918985 17..101 100 -> Plus
arm_3R 22919057..22919303 102..348 100 -> Plus
arm_3R 22919358..22919491 349..482 100 -> Plus

BO24277.pep Sequence

Translation from 16 to 808

> BO24277.pep
MLIKVAKFLSIVAVLLSAVEGAKYLAEKPDFLIPCIVGDPNFNVCLTKNF
QSFFRQWKDGIPGYNAVGSFDPFYIKRVKFTQDASRSIAINADLKEVYVA
GAGQALVLESSWDPNHYVARTLISVPKLRFNFDYKVKGHVSALNLNGHGK
GYFEAENALLLLELAVKPLATSDGYFADVQSVKVNFREIKQFRIKLENLF
GGNKDLEDTAHILFNENWRDFFEVLRPAVEQTVGGVLLDRFKKTFVYVPA
TYLIKDFHASFLDH

BO24277.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14258-PA 258 CG14258-PA 1..258 1..258 1339 100 Plus
CG14457-PB 271 CG14457-PB 7..255 5..256 398 31.7 Plus
CG14457-PC 270 CG14457-PC 7..254 5..256 381 30.6 Plus
CG17189-PA 264 CG17189-PA 2..252 14..260 358 33.6 Plus
CG14259-PA 289 CG14259-PA 23..271 9..256 344 32 Plus