BO24277.complete Sequence
808 bp assembled on 2010-05-05
GenBank Submission: KX799805
> BO24277.complete
GAAGTTATCAGTCGACATGCTTATTAAAGTTGCCAAGTTCCTGAGTATTG
TAGCCGTACTCCTTTCAGCAGTCGAAGGAGCTAAATATCTGGCAGAGAAA
CCCGACTTCCTAATCCCATGTATCGTGGGCGATCCCAACTTTAATGTCTG
TCTGACCAAAAACTTCCAGAGTTTCTTCCGTCAGTGGAAGGACGGAATTC
CCGGCTACAATGCCGTGGGATCCTTTGATCCTTTTTACATCAAGAGAGTG
AAATTTACCCAGGATGCCAGCAGGTCTATAGCTATCAATGCCGATCTGAA
GGAAGTCTATGTAGCAGGTGCTGGTCAAGCATTAGTCTTGGAATCCAGCT
GGGATCCAAATCACTATGTAGCCAGGACTTTGATTTCCGTGCCCAAGTTG
CGTTTCAATTTCGATTACAAAGTCAAAGGACACGTCTCAGCGCTGAATCT
CAATGGTCATGGCAAGGGATACTTCGAAGCTGAAAATGCTCTGTTATTGT
TGGAATTGGCTGTCAAACCGCTGGCCACCTCAGATGGTTATTTCGCTGAT
GTGCAAAGTGTAAAGGTAAATTTCCGCGAGATCAAGCAATTCCGCATCAA
GCTGGAAAATCTCTTTGGCGGCAACAAGGATCTGGAGGATACTGCACACA
TTTTGTTCAACGAAAACTGGCGCGACTTCTTTGAGGTACTGCGTCCGGCG
GTGGAGCAAACAGTTGGCGGAGTGCTTTTGGATCGGTTCAAGAAGACCTT
TGTCTATGTACCAGCTACCTATTTGATTAAAGACTTTCACGCAAGCTTTC
TAGACCAT
BO24277.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:29:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14258-RA | 777 | CG14258-PA | 1..774 | 17..790 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:29:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14258-RA | 901 | CG14258-RA | 37..810 | 17..790 | 3870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:29:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27093825..27094133 | 482..790 | 1545 | 100 | Plus |
3R | 32079331 | 3R | 27093335..27093581 | 102..348 | 1235 | 100 | Plus |
3R | 32079331 | 3R | 27093633..27093769 | 346..482 | 685 | 100 | Plus |
3R | 32079331 | 3R | 27093179..27093263 | 17..101 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:29:21 has no hits.
BO24277.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 12:07:38 Download gff for
BO24277.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14258-RA | 1..774 | 17..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:43 Download gff for
BO24277.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14258-RA | 37..810 | 17..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:20 Download gff for
BO24277.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14258-RA | 37..810 | 17..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:20 Download gff for
BO24277.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27093826..27094133 | 483..792 | 99 | | Plus |
3R | 27093179..27093263 | 17..101 | 100 | -> | Plus |
3R | 27093335..27093581 | 102..348 | 100 | -> | Plus |
3R | 27093636..27093769 | 349..482 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:43 Download gff for
BO24277.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22919548..22919855 | 483..792 | 99 | | Plus |
arm_3R | 22918901..22918985 | 17..101 | 100 | -> | Plus |
arm_3R | 22919057..22919303 | 102..348 | 100 | -> | Plus |
arm_3R | 22919358..22919491 | 349..482 | 100 | -> | Plus |
BO24277.pep Sequence
Translation from 16 to 808
> BO24277.pep
MLIKVAKFLSIVAVLLSAVEGAKYLAEKPDFLIPCIVGDPNFNVCLTKNF
QSFFRQWKDGIPGYNAVGSFDPFYIKRVKFTQDASRSIAINADLKEVYVA
GAGQALVLESSWDPNHYVARTLISVPKLRFNFDYKVKGHVSALNLNGHGK
GYFEAENALLLLELAVKPLATSDGYFADVQSVKVNFREIKQFRIKLENLF
GGNKDLEDTAHILFNENWRDFFEVLRPAVEQTVGGVLLDRFKKTFVYVPA
TYLIKDFHASFLDH
BO24277.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:08:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14258-PA | 258 | CG14258-PA | 1..258 | 1..258 | 1339 | 100 | Plus |
CG14457-PB | 271 | CG14457-PB | 7..255 | 5..256 | 398 | 31.7 | Plus |
CG14457-PC | 270 | CG14457-PC | 7..254 | 5..256 | 381 | 30.6 | Plus |
CG17189-PA | 264 | CG17189-PA | 2..252 | 14..260 | 358 | 33.6 | Plus |
CG14259-PA | 289 | CG14259-PA | 23..271 | 9..256 | 344 | 32 | Plus |