BO24288.complete Sequence
949 bp assembled on 2010-05-05
GenBank Submission: KX794953
> BO24288.complete
GAAGTTATCAGTCGACATGAGTACCTGCCTGGAACGATTTTTCTGTCCCA
ACAAACCTGTCTGCAGCTCGGGCAGAAGAGCCACTTTCTATTATCCTGGA
GGTGGGTCCTACTCTGGCTACTGGTTATGCAACAAACACCAGGGCTGGGG
CGTCAAAAAGACGGCAAAGAGAACTTGCCAGTACTTTTATGGTAAAAAAC
ATCCTGAAGGCCAGCTCATTTATGAGGGAGACTGGGTAATGAACAAACGG
CAGGGAGTCGGATCAATGCTACGCAAACGCGGAACTGAGGTACAGCTGAT
ATATTCGGGAAGATGGTACGATGACATGAAATGTGGAGAAGGTAAGCAAT
TTTATTCAGACGGTTGTGTCTACTTTGGAAAATGGATAAAAAATCGACGG
CACGGTTTGGGCATCCAGTGGTACAACGATGGGAATATTTATGCGGGCGA
ATGGGAAACAGATTTCCGGCATGGACTTGGGGTAATGTTTTACGCTAATG
GAAACCGGTACGAAGGACACTTTGCACGCGGATATAAAAATGGTGAGGGT
GTTTTCTATCATATGCACACGGGACAAATTCAGAAAGGGATGTGGGAAAA
TGATAATTTAAAGACGTCAGTGGTACAGGATGAACCAAAAATCCGTTGTA
ATGCTGTAATAACATCGTATCCGATTCCACGAAACTATCTTAAGTACCCC
AACGAAATAATGCGAGACCTTTTTCAAAGGCACAAAGATTTTAGCAATAA
GCCCCATCGTAGATTCAATGACAGGGTCAGTCTTGCCTTTATTCACCATC
ACCGACAGTACGCCTCCTGCGAAGAGCGCTTCGCTTCACCAACAATTGTA
GACCTCTACCCCAGAGCTGAGTTTGGATGCACTTGCGACTGCGAAAATGT
TGCCAGAAACGAAACCAATATTAGTCAGATAGCAAGCTTTCTAGACCAT
BO24288.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30429-RA | 918 | CG30429-PA | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30429-RA | 1060 | CG30429-RA | 63..977 | 17..931 | 4575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25246529..25247006 | 17..494 | 2390 | 100 | Plus |
| 2R | 25286936 | 2R | 25247064..25247501 | 494..931 | 2190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:29:49 has no hits.
BO24288.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 13:10:20 Download gff for
BO24288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30429-RA | 63..977 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:54 Download gff for
BO24288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30429-RA | 63..977 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:29 Download gff for
BO24288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30429-RA | 63..977 | 17..933 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:29 Download gff for
BO24288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25246529..25247006 | 17..494 | 100 | -> | Plus |
| 2R | 25247065..25247501 | 495..933 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:54 Download gff for
BO24288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 21134052..21134529 | 17..494 | 100 | -> | Plus |
| arm_2R | 21134588..21135024 | 495..933 | 99 | | Plus |
BO24288.pep Sequence
Translation from 16 to 949
> BO24288.pep
MSTCLERFFCPNKPVCSSGRRATFYYPGGGSYSGYWLCNKHQGWGVKKTA
KRTCQYFYGKKHPEGQLIYEGDWVMNKRQGVGSMLRKRGTEVQLIYSGRW
YDDMKCGEGKQFYSDGCVYFGKWIKNRRHGLGIQWYNDGNIYAGEWETDF
RHGLGVMFYANGNRYEGHFARGYKNGEGVFYHMHTGQIQKGMWENDNLKT
SVVQDEPKIRCNAVITSYPIPRNYLKYPNEIMRDLFQRHKDFSNKPHRRF
NDRVSLAFIHHHRQYASCEERFASPTIVDLYPRAEFGCTCDCENVARNET
NISQIASFLDH
BO24288.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:08:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30429-PA | 305 | CG30429-PA | 1..305 | 1..305 | 1737 | 100 | Plus |
| CG14490-PA | 197 | CG14490-PA | 9..181 | 17..203 | 412 | 45 | Plus |
| CG5458-PA | 344 | CG5458-PA | 36..160 | 77..200 | 183 | 32.1 | Plus |
| CG5458-PA | 344 | CG5458-PA | 51..140 | 69..162 | 174 | 36.2 | Plus |
| CG5458-PA | 344 | CG5458-PA | 21..124 | 89..193 | 156 | 31.4 | Plus |
