BO24289.complete Sequence
841 bp assembled on 2010-05-05
GenBank Submission: KX797729
> BO24289.complete
GAAGTTATCAGTCGACATGAATTTAAAGTATAAGCGGCGCTACGAGAGCT
TAAAACGCTCCGTCAAGAGTTATCTACTGGAGAACGCCGCCCTCACGGAT
GAGATCTGTCGTCTGCAGGCCGAACTATCTGTGACCCGATCCCAAAGACT
TTACTTGATAGAGCGCCTCATGTTTCACGAGGGCTTGGAGAAATCCAACA
GTGGACGACCCAGTGTCTCGAATGGAAAAAACGACGCCGCTGAAACCACA
AAGAAATACAGTCCTGTAGTTTCGCATAAGAACCCCGTCGAAGATAAGCC
AAAAAATGTTACAATTGTACGGAAAAAGAAGCCCATGTTTCCGATGAACC
TAAATAATGTATTACTCCACTCACTGGGCGAGATTATATCAGTGAATCCC
AATTTTCACACTGAGAGCTGGATATATCCCGTGGGATATGTGGCCACACG
AATCTACGCCCATCCCAAGGATCCGCGCAAGAAGTGTGTGTTCACATGTA
AGATTTTAAATAACGCCGGGATTCCTCAGTTCCAAATAATACCCGACAAT
GATCTGGATGGAGTTTTCTTCGGAGAAAGCGCCAATATGTGTCACATGGA
GCTTCTTAACTCCATTCAGCGGTCTCCCTGCGTTAAAATTAAAATACCGT
TCGACGTACAGGGCGAGGTTTTCTTTGGCTTGTCAAACCAAAAAACACAA
TCGCTGCTTATGATGGATCCTGCCTTTCATCAGTGCACGAATTTCAAGGG
ATTCGCGGTGCAGAATGTTCAGTCCTTAAACAGCGCGTCTTTATCCTTTG
AGACGCTCCAGGGATTTCTATCTGCAAGCTTTCTAGACCAT
BO24289.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31111-RA | 810 | CG31111-PA | 1..807 | 17..823 | 4005 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31111-RA | 952 | CG31111-RA | 81..887 | 17..823 | 4005 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25055141..25055885 | 823..79 | 3695 | 99.7 | Minus |
3R | 32079331 | 3R | 25056034..25056097 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:23:12 has no hits.
BO24289.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:17 Download gff for
BO24289.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31111-RA | 81..887 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:05 Download gff for
BO24289.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31111-RA | 81..887 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:08 Download gff for
BO24289.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31111-RA | 81..887 | 17..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:08 Download gff for
BO24289.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25055138..25055884 | 80..825 | 99 | <- | Minus |
3R | 25056035..25056097 | 17..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:05 Download gff for
BO24289.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20880860..20881606 | 80..825 | 99 | <- | Minus |
arm_3R | 20881757..20881819 | 17..79 | 100 | | Minus |
BO24289.pep Sequence
Translation from 16 to 841
> BO24289.pep
MNLKYKRRYESLKRSVKSYLLENAALTDEICRLQAELSVTRSQRLYLIER
LMFHEGLEKSNSGRPSVSNGKNDAAETTKKYSPVVSHKNPVEDKPKNVTI
VRKKKPMFPMNLNNVLLHSLGEIISVNPNFHTESWIYPVGYVATRIYAHP
KDPRKKCVFTCKILNNAGIPQFQIIPDNDLDGVFFGESANMCHMELLNSI
QRSPCVKIKIPFDVQGEVFFGLSNQKTQSLLMMDPAFHQCTNFKGFAVQN
VQSLNSASLSFETLQGFLSASFLDH
BO24289.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31111-PA | 269 | CG31111-PA | 1..269 | 1..269 | 1404 | 100 | Plus |