Clone BO24289 Report

Search the DGRC for BO24289

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:242
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptCG31111-RA
Protein status:BO24289.pep: Imported from assembly
Sequenced Size:841

Clone Sequence Records

BO24289.complete Sequence

841 bp assembled on 2010-05-05

GenBank Submission: KX797729

> BO24289.complete
GAAGTTATCAGTCGACATGAATTTAAAGTATAAGCGGCGCTACGAGAGCT
TAAAACGCTCCGTCAAGAGTTATCTACTGGAGAACGCCGCCCTCACGGAT
GAGATCTGTCGTCTGCAGGCCGAACTATCTGTGACCCGATCCCAAAGACT
TTACTTGATAGAGCGCCTCATGTTTCACGAGGGCTTGGAGAAATCCAACA
GTGGACGACCCAGTGTCTCGAATGGAAAAAACGACGCCGCTGAAACCACA
AAGAAATACAGTCCTGTAGTTTCGCATAAGAACCCCGTCGAAGATAAGCC
AAAAAATGTTACAATTGTACGGAAAAAGAAGCCCATGTTTCCGATGAACC
TAAATAATGTATTACTCCACTCACTGGGCGAGATTATATCAGTGAATCCC
AATTTTCACACTGAGAGCTGGATATATCCCGTGGGATATGTGGCCACACG
AATCTACGCCCATCCCAAGGATCCGCGCAAGAAGTGTGTGTTCACATGTA
AGATTTTAAATAACGCCGGGATTCCTCAGTTCCAAATAATACCCGACAAT
GATCTGGATGGAGTTTTCTTCGGAGAAAGCGCCAATATGTGTCACATGGA
GCTTCTTAACTCCATTCAGCGGTCTCCCTGCGTTAAAATTAAAATACCGT
TCGACGTACAGGGCGAGGTTTTCTTTGGCTTGTCAAACCAAAAAACACAA
TCGCTGCTTATGATGGATCCTGCCTTTCATCAGTGCACGAATTTCAAGGG
ATTCGCGGTGCAGAATGTTCAGTCCTTAAACAGCGCGTCTTTATCCTTTG
AGACGCTCCAGGGATTTCTATCTGCAAGCTTTCTAGACCAT

BO24289.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31111-RA 810 CG31111-PA 1..807 17..823 4005 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31111-RA 952 CG31111-RA 81..887 17..823 4005 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25055141..25055885 823..79 3695 99.7 Minus
3R 32079331 3R 25056034..25056097 80..17 320 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:23:12 has no hits.

BO24289.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:17 Download gff for BO24289.complete
Subject Subject Range Query Range Percent Splice Strand
CG31111-RA 81..887 17..825 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:05 Download gff for BO24289.complete
Subject Subject Range Query Range Percent Splice Strand
CG31111-RA 81..887 17..825 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:08 Download gff for BO24289.complete
Subject Subject Range Query Range Percent Splice Strand
CG31111-RA 81..887 17..825 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:08 Download gff for BO24289.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25055138..25055884 80..825 99 <- Minus
3R 25056035..25056097 17..79 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:05 Download gff for BO24289.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20880860..20881606 80..825 99 <- Minus
arm_3R 20881757..20881819 17..79 100   Minus

BO24289.pep Sequence

Translation from 16 to 841

> BO24289.pep
MNLKYKRRYESLKRSVKSYLLENAALTDEICRLQAELSVTRSQRLYLIER
LMFHEGLEKSNSGRPSVSNGKNDAAETTKKYSPVVSHKNPVEDKPKNVTI
VRKKKPMFPMNLNNVLLHSLGEIISVNPNFHTESWIYPVGYVATRIYAHP
KDPRKKCVFTCKILNNAGIPQFQIIPDNDLDGVFFGESANMCHMELLNSI
QRSPCVKIKIPFDVQGEVFFGLSNQKTQSLLMMDPAFHQCTNFKGFAVQN
VQSLNSASLSFETLQGFLSASFLDH

BO24289.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31111-PA 269 CG31111-PA 1..269 1..269 1404 100 Plus