BO24301.complete Sequence
409 bp assembled on 2010-05-18
GenBank Submission: KX795346
> BO24301.complete
GAAGTTATCAGTCGACATGCGTGACAAAAGTCAGGAGCCATGTTGCCTGC
CACTGAAGGAGGAGTTCCAACGCTCCAAGTTCTCGCTGCATCACGATGAT
CCTGGCGACTTCTGTCGTTCGCAATGGCAGAAGGGCGATCGGAATATCAT
CTGGCTGCTATATCGATGGATCCTGGCTGCTTTTTTCGCAGCGGGTGTGA
TCGGCAGCATGGTTGAAACCTTTAACGGTGGTCGCTGGTTTATTTATCTC
ACGGATTGGGGTTTTTCCCTATGCTTTTATTGCTGTACATATGGCGCCAT
AATCGCCACCATCTACTTCATAAAGCCTTCTTATTTTGCTATTGCTCGTA
GATGTACAAAAACTATTAACAGGCTCCTGGCAGTTGGGCCCGCAAGCTTT
CTAGACCAT
BO24301.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:39:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9555-RC | 828 | CG9555-PC | 1..324 | 17..340 | 1620 | 100 | Plus |
CG9555-RA | 828 | CG9555-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
CG17906-RA | 828 | CG17906-PA | 28..324 | 44..340 | 450 | 76.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:39:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9555-RC | 1478 | CG9555-RC | 325..652 | 13..340 | 1625 | 99.7 | Plus |
CG9555-RA | 1246 | CG9555-RA | 93..420 | 13..340 | 1625 | 99.7 | Plus |
CG17906-RA | 971 | CG17906-RA | 100..396 | 44..340 | 450 | 76.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:39:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8992059..8992384 | 13..338 | 1615 | 99.7 | Plus |
2L | 23513712 | 2L | 8994490..8994784 | 44..338 | 440 | 76.6 | Plus |
2L | 23513712 | 2L | 8992456..8992491 | 338..373 | 180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:39:21 has no hits.
BO24301.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:23:59 Download gff for
BO24301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9555-RB | 75..449 | 17..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:21 Download gff for
BO24301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9555-RA | 97..420 | 17..340 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:30 Download gff for
BO24301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9555-RA | 97..420 | 17..340 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:30 Download gff for
BO24301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8992063..8992384 | 17..338 | 100 | -> | Plus |
2L | 8992457..8992491 | 339..373 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:21 Download gff for
BO24301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8992063..8992384 | 17..338 | 100 | -> | Plus |
arm_2L | 8992457..8992491 | 339..373 | 100 | -> | Plus |
BO24301.pep Sequence
Translation from 16 to 409
> BO24301.pep
MRDKSQEPCCLPLKEEFQRSKFSLHHDDPGDFCRSQWQKGDRNIIWLLYR
WILAAFFAAGVIGSMVETFNGGRWFIYLTDWGFSLCFYCCTYGAIIATIY
FIKPSYFAIARRCTKTINRLLAVGPASFLDH
BO24301.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9555-PC | 275 | CG9555-PC | 1..108 | 1..108 | 614 | 100 | Plus |
CG9555-PA | 275 | CG9555-PA | 1..108 | 1..108 | 614 | 100 | Plus |
CG17906-PA | 275 | CG17906-PA | 1..108 | 1..108 | 494 | 76.9 | Plus |
CG4480-PC | 272 | CG4480-PC | 18..114 | 6..104 | 264 | 50.5 | Plus |
CG4480-PB | 272 | CG4480-PB | 18..114 | 6..104 | 264 | 50.5 | Plus |