Clone BO24309 Report

Search the DGRC for BO24309

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:243
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG12433-RB
Protein status:BO24309.pep: Imported from assembly
Sequenced Size:1015

Clone Sequence Records

BO24309.complete Sequence

1015 bp assembled on 2010-05-18

GenBank Submission: KX798086

> BO24309.complete
GAAGTTATCAGTCGACATGGCCTGGTTAACTAAAATAATCATTATATTTA
TCCTTTTGCTACACACTCAATTGACTCAACTGATACAGTATATTGACGAT
GGTGACACATTTGATGGCTTTAACTCCATATTTGAAAAGCCAAAGAAGCA
ACGAAGCGGTGCCATGGAGGACGATTTCGATCGAGATCGGGATCAGTGGA
AGGTCAATACCGACATGGACTCGCAATCGGGCATATGTCCCGCCGAAAAT
CCGAATGATGTGAAGTATGAAAAGAAGGATCGCTGCAAGGTTGACAGGAA
GATGGTCAAGGACGAGGACGATGACGAGAATGCCGATCCTGCGGGCAATA
GTGATGACGATGATATCCATGATGGTGATGAAGACAATGGCGATGATGAG
GCTTATGAAGAGGAGGACGACGACATTAGTTTTGAGGATGAAGCTTTTGT
TTCGAGAATTAACTGTTTGTTGGGATCTCTGCACAAGCACACCAAAGCCA
TAACCGATAATCTGCAGATCCTTCAATCCCGCTTGTCAAAAGCGAAAAAT
GACAACATATGCAGAAACAACAACCAAGGCACTACGCCTACGGAACATCC
TAGTCTGAAATGGTCCAAGAAGCCGGATTTCTATGAGGCAACCGAGCTGT
GTGCTGATGACAACTGCCATTTCGAGGACAGTGTGGATAACAAAGAGGTC
CAGCCACAAGCTTTTACTGAGGATCGTCGAGTGATGGTTCCGCCTCTATT
GCAACTCTTCCATGGTCCTGTCCAGCTGCAAACCACTTTGAACAGCGGCC
AGGACATCACGGGATCAAAGTCGAGATATTGGATGACCTCACCGGAAACA
TCAGAGGAGTTTCAGGCTTCATCGCAATTACAGCCGGATGAAAAAAATCA
AGAACGATACGAGGATTACGATGCTAAATTGCGTCGCCTCATGGACAGTC
GGGATGAGATCGAGCGAAATGTGATGAGAATGATAACTCCGGATTTAGCA
AGCTTTCTAGACCAT

BO24309.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43996-RA 984 CG43996-PA 1..981 17..997 4905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43996-RA 1067 CG43996-RA 21..1001 17..997 4905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17022324..17023304 17..997 4905 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:39:59 has no hits.

BO24309.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:06 Download gff for BO24309.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 21..1001 17..999 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:35 Download gff for BO24309.complete
Subject Subject Range Query Range Percent Splice Strand
CG43996-RA 21..1001 17..999 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:41 Download gff for BO24309.complete
Subject Subject Range Query Range Percent Splice Strand
CG43996-RA 21..1001 17..999 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:41 Download gff for BO24309.complete
Subject Subject Range Query Range Percent Splice Strand
X 17022324..17023304 17..999 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:35 Download gff for BO24309.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16916357..16917337 17..999 99   Plus

BO24309.pep Sequence

Translation from 16 to 1015

> BO24309.pep
MAWLTKIIIIFILLLHTQLTQLIQYIDDGDTFDGFNSIFEKPKKQRSGAM
EDDFDRDRDQWKVNTDMDSQSGICPAENPNDVKYEKKDRCKVDRKMVKDE
DDDENADPAGNSDDDDIHDGDEDNGDDEAYEEEDDDISFEDEAFVSRINC
LLGSLHKHTKAITDNLQILQSRLSKAKNDNICRNNNQGTTPTEHPSLKWS
KKPDFYEATELCADDNCHFEDSVDNKEVQPQAFTEDRRVMVPPLLQLFHG
PVQLQTTLNSGQDITGSKSRYWMTSPETSEEFQASSQLQPDEKNQERYED
YDAKLRRLMDSRDEIERNVMRMITPDLASFLDH

BO24309.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:49:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG43996-PA 327 CG43996-PA 1..327 1..327 1749 100 Plus