BO24312.complete Sequence
1690 bp assembled on 2010-06-28
GenBank Submission: KX796751
> BO24312.complete
GAAGTTATCAGTCGACATGAGGCTCACGTTGGCCTGGCTCAGCCTCTGCC
TGGCGATTTATTGCGGCGGTGGCCATGGCCATGGCAATGTGGTCCTATCT
TTGCCACCATCGCTTATCGCCACGGCCACGAAGGCGGCCTTGAGCCACCA
ACGGCAGCAGAAGCAGCAGCAGCAGCATCAGAAAAAGGATGCACGCGTCC
TGTTTGACAGCCCCGCCGATGCACTGCGCGATATGATGCACAACGGCAAT
GGCAATGGCAATGGACCCATGGATTCTGGAAAATTTAGCCTGTCCGATGT
GGAGCAACCAGCAGCGCAGCGCTCTGAGGATTTTAATCGAAACGCATATG
ATTTAGGGGCCAGGCAATCAGCGCCGCAGGAAATTGCAATGGGAATGGAA
CTGGGCATGGGTCTGGGTCTGGGGCCCAACAACTATCGCACCACGCCCCC
TCATCGGTATTGGGGCCAGCGTTGTCAGGGTCGATCCGGCGGATCTGGAA
CCAGCAAGTGTCCGCAGGAATACTATCGCACCATGCTGGCGGCCAGGAAC
AAAGAGGCGCTGTCCCGCCTCCACATGCAGCTGAGTTCGATGCAGGATTC
CGATTCTGGGGCCAGCTCCTCCTCGGATTCCGAGGAGGAACATGTCGACG
ATGAGGAGCAGAGCAACAACGAGGTCTTCATGCTGCTAACTGGCGAACAG
GATTTGATGAAGTTTCTGCACTGGGCCATGCAGGTCCTGTATCCCATTGA
ACGTCCTTTGGGCAATCTGAGCGATGGAGCTGCCGAGAACTACTATCCAG
GAATGTTTCTCTGGAAGAAACTAAATCTTTCGGGCCATCTGGAACCCCCA
CTTATTGTGGATGAGCCCCAGTATGTGCTGGTACGAAGGGAAAAGCTTTT
CGATGGCTATCAATTTGGAGACATGAGCAAGGAGAACGATCCCTTCATAC
CGCCTCGAGGTCGCAAGCACAGCGGATCGCTGGATCTGGACGCCCTGATG
AACCGGTACGAACCCTTTGTGCCCAATCGCGGCAAGCGCGACAAGGTCAA
GGATCTGTTCAAGTATGACGACCTGTTCTATCCGCATCGCGGCAAAAAGC
ATCGCAACCTCTTCCAAGTGGACGATCCCTTCTTTGCCACCCGGGGCAAG
AAGCTGCAGCTCCGGGATCTTTACAACGCCGACGATCCATTCGTTCCGAA
TCGCGGCAAGCGGCACTTGACAGCCAGTGCCGGGAAATTGGGTGAGACGA
TGGCGGGTGGTGGAAAATGGCCAGATGACAGCAACAACTACTGGCCGCTA
AGAATGTCAACGCATAAAATTAATGGTTACGATCAATCAGTCAGGCCATC
ACTGTCAGTGGAGGATGCTGCTGCATCGTTGGCTTCTTGGCGACTGCCCG
CTAATAGATTGCACTCGACAAGATCAATGTCAGCCGATCTGCGGCAGCAA
TTGCTCTTGCCACATGTCCGCTTCATTGGCAATCCGAACATGCGCCAGCA
GCAGCAGCAGCAGCAGCAGCATCAGGTGAAAACCTCATCCTGGCAGGCAG
AGGAGCGCCTCCGGAGATCCATCCTGGCCCCGGGCGAATCAAACGATGCC
CACGAGACACAATTAACGCTATCGCACCCGGCTAATCCACATTTGGTCAC
CGATACGGACAACCTAAACATTGCAAGCTTTCTAGACCAT
BO24312.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| natalisin-RC | 1659 | CG34388-PC | 1..1656 | 17..1672 | 8280 | 100 | Plus |
| natalisin-RD | 1662 | CG34388-PD | 1..1659 | 17..1672 | 8215 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:49:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| natalisin-RC | 1996 | CG34388-RC | 199..1855 | 16..1672 | 8285 | 100 | Plus |
| natalisin-RD | 1989 | CG34388-RD | 199..1858 | 16..1672 | 8220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14420971..14421724 | 919..1672 | 3770 | 100 | Plus |
| 3R | 32079331 | 3R | 14418791..14419322 | 16..547 | 2660 | 100 | Plus |
| 3R | 32079331 | 3R | 14420527..14420903 | 544..920 | 1885 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:49:28 has no hits.
BO24312.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 11:09:43 Download gff for
BO24312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34388-RC | 186..1841 | 17..1674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:19 Download gff for
BO24312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34388-RC | 200..1855 | 17..1674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:37 Download gff for
BO24312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| natalisin-RC | 200..1855 | 17..1674 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:37 Download gff for
BO24312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14418792..14419321 | 17..546 | 100 | -> | Plus |
| 3R | 14420530..14420903 | 547..920 | 100 | -> | Plus |
| 3R | 14420973..14421724 | 921..1674 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:19 Download gff for
BO24312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10244514..10245043 | 17..546 | 100 | -> | Plus |
| arm_3R | 10246252..10246625 | 547..920 | 100 | -> | Plus |
| arm_3R | 10246695..10247446 | 921..1674 | 99 | | Plus |
BO24312.pep Sequence
Translation from 16 to 1690
> BO24312.pep
MRLTLAWLSLCLAIYCGGGHGHGNVVLSLPPSLIATATKAALSHQRQQKQ
QQQHQKKDARVLFDSPADALRDMMHNGNGNGNGPMDSGKFSLSDVEQPAA
QRSEDFNRNAYDLGARQSAPQEIAMGMELGMGLGLGPNNYRTTPPHRYWG
QRCQGRSGGSGTSKCPQEYYRTMLAARNKEALSRLHMQLSSMQDSDSGAS
SSSDSEEEHVDDEEQSNNEVFMLLTGEQDLMKFLHWAMQVLYPIERPLGN
LSDGAAENYYPGMFLWKKLNLSGHLEPPLIVDEPQYVLVRREKLFDGYQF
GDMSKENDPFIPPRGRKHSGSLDLDALMNRYEPFVPNRGKRDKVKDLFKY
DDLFYPHRGKKHRNLFQVDDPFFATRGKKLQLRDLYNADDPFVPNRGKRH
LTASAGKLGETMAGGGKWPDDSNNYWPLRMSTHKINGYDQSVRPSLSVED
AAASLASWRLPANRLHSTRSMSADLRQQLLLPHVRFIGNPNMRQQQQQQQ
QHQVKTSSWQAEERLRRSILAPGESNDAHETQLTLSHPANPHLVTDTDNL
NIASFLDH
BO24312.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| natalisin-PC | 552 | CG34388-PC | 1..552 | 1..552 | 2946 | 100 | Plus |
| natalisin-PD | 553 | CG34388-PD | 1..553 | 1..552 | 2934 | 99.8 | Plus |
