Clone BO24314 Report

Search the DGRC for BO24314

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:243
Well:14
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO24314.pep: Imported from assembly
Sequenced Size:1192

Clone Sequence Records

BO24314.complete Sequence

1192 bp assembled on 2010-05-18

> BO24314.complete
GAAGTTATCAGTCGACATGATGGGAGTACGACCGAATCGAAAACGTTTGG
AGCTGATGCTAATGTTGCTGATCGGTCTGGCATGGGGAATACTTCTGTCC
GAGCTGATGAAACGAACTCGCTGGCAGAATCATGCGGATCGGCTGAAGGA
GGAGAGCAGTCCCTTTCCGAGCAGCCAGCGGAGCAGGAACCTACGCACCC
CACCCACCATTGCTCCTTCGACCACGAATCCACCGCCGGACATCCTGGCC
GCGCGACTCTTCAACGAGACGCGTGTCCTGTGCATGGTGCTGACCAGTCC
AAAGACGCACCACACCCGCGCCATTCACATCAAACGCACCTGGGGAAGGC
GCTGCAACAAGCTGATCTTCATGAGCACCAAGGCGGACAAGGAACTGGGA
TCCGTGGCGCTCAATGTGAGGGAGGGCTACTCCAATTTGTGGCCCAAGAC
CCGGGCGGCGCTGCAGTACGTCTATAAGCACCATTTCCAGAAGTACGACT
GGTTCCTCAAAGCGGACGATGACACCTATTTTATCATGGAGAACCTGCGC
GCCTTTCTACACGCCCACAATTTCAGGGAACCGGTTTATTTTGGAAACAA
GTTCCGCCAGCATGTAAAAGAGGGATACATGTCTGGAGGAGCTGGTTATG
TGCTGAGTAAAATGGCCCTCCATCGGCTGATTAAACTGGGTTTCAGCAAC
AGCAGCATTTGCACCAATCGCAATTATGGCTACGAGGATGTGGAACTGGG
ACGATGTCTGGCCGGTGTGGGCGTCGTGGGTGGTGATTCCCGGGATGAGC
AGGGGTTAAGTCGCTTCATTCCTTTCTCCCCACTTCACTGGTATCCCCAG
CCACCGGATTGGTACCAGCCACTACTCTACTACACATCCCCAGATAACTC
CAGTGACTGCTGCTCAAATACGGCCATCTCGTTTCACTACAACAACGCAC
AGGAGTTCTACGTGCTCGAATATATCATCTACAAGCTACGAATTTTTGGC
ATAAACAGAGAACTTGGTCCACTGCCAAAAAAGAAAGCCAGTTCTAGGCC
AATGTCGATTAATTTACAGACCACAAAAGAGGAAAACGGCCATATTGCTC
TCATTAAAATGATGCCAAGAAAAAACGTCACTACACCAAATTACAGAACC
AAGACCACTTCCAAGTTTAAAAAAGCAAGCTTTCTAGACCAT

BO24314.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:40:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2975-RA 1158 CG2975-PA 1..1155 20..1174 5775 100 Plus
CG34056-RA 1026 CG34056-PA 248..311 336..399 185 85.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2975-RA 1884 CG2975-RA 524..1681 17..1174 5790 100 Plus
CG34056-RA 1303 CG34056-RA 412..475 336..399 185 85.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2840994..2841502 17..525 2545 100 Plus
2L 23513712 2L 2842157..2842435 896..1174 1395 100 Plus
2L 23513712 2L 2841820..2842094 621..895 1375 100 Plus
2L 23513712 2L 2841563..2841664 526..627 495 99 Plus
3L 28110227 3L 896362..896425 336..399 185 85.9 Plus
Blast to na_te.dros performed on 2014-11-28 02:40:23 has no hits.

BO24314.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:08 Download gff for BO24314.complete
Subject Subject Range Query Range Percent Splice Strand
CG2975-RA 524..1675 17..1168 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:43 Download gff for BO24314.complete
Subject Subject Range Query Range Percent Splice Strand
CG2975-RA 524..1675 17..1168 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:49 Download gff for BO24314.complete
Subject Subject Range Query Range Percent Splice Strand
CG2975-RA 524..1675 17..1168 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:49 Download gff for BO24314.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2842157..2842429 896..1168 100   Plus
2L 2841822..2842094 623..895 100 -> Plus
2L 2840994..2841502 17..525 100 -> Plus
2L 2841563..2841659 526..622 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:43 Download gff for BO24314.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2840994..2841502 17..525 100 -> Plus
arm_2L 2841563..2841659 526..622 100 -> Plus
arm_2L 2841822..2842094 623..895 100 -> Plus
arm_2L 2842157..2842429 896..1168 100   Plus

BO24314.pep Sequence

Translation from 16 to 1192

> BO24314.pep
MMGVRPNRKRLELMLMLLIGLAWGILLSELMKRTRWQNHADRLKEESSPF
PSSQRSRNLRTPPTIAPSTTNPPPDILAARLFNETRVLCMVLTSPKTHHT
RAIHIKRTWGRRCNKLIFMSTKADKELGSVALNVREGYSNLWPKTRAALQ
YVYKHHFQKYDWFLKADDDTYFIMENLRAFLHAHNFREPVYFGNKFRQHV
KEGYMSGGAGYVLSKMALHRLIKLGFSNSSICTNRNYGYEDVELGRCLAG
VGVVGGDSRDEQGLSRFIPFSPLHWYPQPPDWYQPLLYYTSPDNSSDCCS
NTAISFHYNNAQEFYVLEYIIYKLRIFGINRELGPLPKKKASSRPMSINL
QTTKEENGHIALIKMMPRKNVTTPNYRTKTTSKFKKASFLDH

BO24314.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:50:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG2975-PA 385 CG2975-PA 1..385 2..386 2070 100 Plus
C1GalTA-PA 388 CG9520-PA 91..379 77..361 738 49.7 Plus
C1GalTA-PC 388 CG9520-PC 91..379 77..361 738 49.7 Plus
C1GalTA-PB 388 CG9520-PB 91..379 77..361 738 49.7 Plus
CG8708-PC 444 CG8708-PC 11..345 8..339 696 43.6 Plus