Clone BO24315 Report

Search the DGRC for BO24315

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:243
Well:15
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO24315.pep: Imported from assembly
Sequenced Size:1252

Clone Sequence Records

BO24315.complete Sequence

1252 bp assembled on 2010-05-18

> BO24315.complete
GAAGTTATCAGTCGACATGCCGAAAGGTTTGGCCAAAATGCTAAGACACC
TGCCGCTAATCTCGCTGCTGCTGTTCGCACCTACTGTGTTGGCCTACTTC
GAGGGCTGTGATAACACCTTCAACCTCAGTCCGGGGACCACCTACGTTGA
GTCGCCCTACTACCCCAACAATTATCCTGGCGGCACTTCCTGTCGCTACA
AGTTCACCGCTCCCCTGGACTACTACATACAAGTGCAATGTTCCCTGGGA
ATTCCAAAGGGCAATGGTCAGTGCACCACGGATAACTTTTGGCTCGACAC
AGAGGGTGATCTTCTGATGCGCGGTGCCGAGAACTTCTGTGGCTCCGGAA
CCCTTTCACGGGAGTCCCTGTTCACGGAGCTGGTTTTCGCCTACATCTCC
ACCGGCACGAAGGGAGGAAGCTTTAAGTGCACCCTGACCACCGTCAAACA
GAACTGTAATTGTGGCTGGTCGGCCACGACGCGGATTGCCAATGGCCAAC
AGGCGGCAGCCAACGAGTTTCCCAGCATGGCGGCCCTCAAGGATGTGACC
AAGAACCAGGCGTCCTTCTGTGGCGGAACCATAGTGGCCCATCGTTATAT
TTTAACTGCTGCCCATTGTATTTACCAAGTTAGCAGGGCCACGAATATTG
TGGCTATTGTGGGAACCAATGACCTGGGAAATCCTTCCAGTTCCAGGTAC
TACCAGCAGTATAATATTCAGCAGATGATACCACATGAGCAGTATGTTAG
CGACCCCGACGTAAACAATGATATCGCAGTTTTGATAACCGCCAGCAATA
TTCAGTGGTCCCGAGGCGTGGGACCCATTTGTCTGCCTCCCGTAGGAACG
AGCACACCATTCACTTACGACCTCGTCGACGTGATTGGCTATGGCACGGT
CTTCTTTGCCGGACCCACGTCCACAAGTCTGCAGAAGATCAATCTGAATG
TGGTCACCAACCAGGACTGCCAGACGGAGTACAACAATGTGGCCACGATA
TACACTGGGCAAATGTGCACCTATGACTACTCGGGCACAGGTCGCGACTC
CTGCCAGTTTGACTCCGGTGGCCCAGTCATTCTGCGGAAGTCCAGGCAGT
TCTTGGTCGGAATCATCAGCTACGGAAAGAGCTGTGCTGAATCGCAGTAC
CCGATGGGTGTCAATACCAGGATAACGTCGTATATTAGTTGGATACGCCA
AAAGATCGGAAACTCCAATTGTGTTGTCAGCTTGGCAAGCTTTCTAGACC
AT

BO24315.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:40:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30371-RA 1200 CG30371-PA 1..1197 38..1234 5985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30371-RA 1258 CG30371-RA 6..1223 17..1234 6090 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8267678..8268062 1234..850 1925 100 Minus
2R 25286936 2R 8268693..8269019 584..258 1635 100 Minus
2R 25286936 2R 8269086..8269329 260..17 1220 100 Minus
2R 25286936 2R 8268119..8268285 850..684 835 100 Minus
2R 25286936 2R 8268373..8268473 683..583 505 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:40:35 has no hits.

BO24315.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:09 Download gff for BO24315.complete
Subject Subject Range Query Range Percent Splice Strand
CG30371-RA 1..1197 38..1236 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:48 Download gff for BO24315.complete
Subject Subject Range Query Range Percent Splice Strand
CG30371-RA 6..1223 17..1236 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:54 Download gff for BO24315.complete
Subject Subject Range Query Range Percent Splice Strand
CG30371-RA 6..1223 17..1236 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:54 Download gff for BO24315.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8267676..8268062 850..1236 99 <- Minus
2R 8268120..8268285 684..849 100 <- Minus
2R 8268373..8268471 585..683 100 <- Minus
2R 8268693..8269017 260..584 100 <- Minus
2R 8269087..8269329 17..259 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:48 Download gff for BO24315.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4155878..4155976 585..683 100 <- Minus
arm_2R 4156198..4156522 260..584 100 <- Minus
arm_2R 4155181..4155567 850..1236 99 <- Minus
arm_2R 4155625..4155790 684..849 100 <- Minus
arm_2R 4156592..4156834 17..259 100   Minus

BO24315.pep Sequence

Translation from 16 to 1252

> BO24315.pep
MPKGLAKMLRHLPLISLLLFAPTVLAYFEGCDNTFNLSPGTTYVESPYYP
NNYPGGTSCRYKFTAPLDYYIQVQCSLGIPKGNGQCTTDNFWLDTEGDLL
MRGAENFCGSGTLSRESLFTELVFAYISTGTKGGSFKCTLTTVKQNCNCG
WSATTRIANGQQAAANEFPSMAALKDVTKNQASFCGGTIVAHRYILTAAH
CIYQVSRATNIVAIVGTNDLGNPSSSRYYQQYNIQQMIPHEQYVSDPDVN
NDIAVLITASNIQWSRGVGPICLPPVGTSTPFTYDLVDVIGYGTVFFAGP
TSTSLQKINLNVVTNQDCQTEYNNVATIYTGQMCTYDYSGTGRDSCQFDS
GGPVILRKSRQFLVGIISYGKSCAESQYPMGVNTRITSYISWIRQKIGNS
NCVVSLASFLDH

BO24315.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:50:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG30371-PA 399 CG30371-PA 1..399 8..406 2138 100 Plus
CG30375-PA 398 CG30375-PA 24..397 31..403 762 41.4 Plus
CG14760-PA 529 CG14760-PA 246..518 128..396 443 36.9 Plus
CG3355-PA 314 CG3355-PA 61..304 142..395 360 34.4 Plus
MP1-PA 390 CG1102-PA 119..388 148..397 320 31.9 Plus
CG14760-PA 529 CG14760-PA 10..125 18..130 216 40.5 Plus