Clone BO24328 Report

Search the DGRC for BO24328

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:243
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG3769-RA
Protein status:BO24328.pep: Imported from assembly
Sequenced Size:1138

Clone Sequence Records

BO24328.complete Sequence

1138 bp assembled on 2010-05-18

GenBank Submission: KX794863

> BO24328.complete
GAAGTTATCAGTCGACATGCGCTTGCCGCTAATCTTTCATAGCCTGCACC
AGCGTCTTCAAAAAATGTTTGTAAAGAGAACTGAGGGCGGCGAAAGTGCC
ACGCCCAGCATTCAGGACATCGCCGGTCGACTGGCGGAGGAGCAGCAGCG
GCTTCGCCAATTGGAGGCCACAACGACTCCCAAAGAGCGGACAATTCTTG
TCTTGGGAAGCAAGTGTGTGGGTAAGACGACGGCCATTAATAAGTTCTTT
GATCGCGAGGAACACGCAACGCGGCCAACTCTAGCACTGGAGTACAGCTT
TGGACGACGGATTGGCAGTGGAAAGTCACCGCAGGTGATGAACGTTTGGG
AACTGGGCTCCCTGGACAATGCCGAGCAATTGCTGGAAGTACCAATGCGG
ACACATGGTTTGCAGCAACTAGCCGTCATCCTTATGCTAGATCTCTCCCA
GCCACAGCGATTTTGGACGGATTTGGAGTGCGCATACAAGGGACTGAGGG
ATACGGCGCAGCAGATGATGGAGAAGGTAACACCGGAGCTTAGGGAAATC
CTCGAACAGCGAACAGTGGAGCGAGTGGGTCAGCAGAACAAAGATTCGGA
AAAACTAGACCCTCTGCCCTTTCCAGTGATAATTGTCGGTGGGAAGTACG
ATGTGTTTTCTGGTTTCGATCCTATTATCAGGAAGCACACCTGCCGCTGC
TTGCGATCGATGGCCCACCTCATAGGTGGCGCATTGCTGTTCTATTCCCA
GAAGATGCCCAAGTTGGCCAAGGTCCTGAGGGACACCATTTGTCACTTGG
GATTTGGCAGTCCTGCTCATCCGTTCCGCTCTCATGTCGTGGACTTCAAT
GAACCACTGTGCATTTGGTTTGGAACGGACAGTTGGTCGAAAATTGGTGA
TACTGGCGCCCAAAGTGTGGAGCGAATTGGAGCCACATTCGGAATGGAAG
TACCGCAGCTGCAGCTAGAGAAGCAGAAGCTAAAAGAAACCACCGATCCG
GCCAAGGACCCTGGTTTCAAGGAGTTAGTCATCGATGAGATCCGATCGCA
GAAGAACGAGGAACTCGCAGGATTAATGAGGGATGTCTTGCTGCGCGGAA
AGTTCGAAAGTGTTCAAACTGCAAGCTTTCTAGACCAT

BO24328.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-RA 1107 CG3769-PA 1..1104 17..1120 5520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-RA 1333 CG3769-RA 112..1215 17..1120 5520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9435824..9436724 220..1120 4505 100 Plus
2L 23513712 2L 9435510..9435714 17..221 1025 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:41:38 has no hits.

BO24328.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:15 Download gff for BO24328.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1104 17..1122 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:13 Download gff for BO24328.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 112..1215 17..1122 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:13 Download gff for BO24328.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 112..1215 17..1122 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:13 Download gff for BO24328.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9435510..9435713 17..220 100 -> Plus
2L 9435825..9436724 221..1122 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:13 Download gff for BO24328.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9435510..9435713 17..220 100 -> Plus
arm_2L 9435825..9436724 221..1122 99   Plus

BO24328.pep Sequence

Translation from 16 to 1138

> BO24328.pep
MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLE
ATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIG
SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW
TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL
PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKL
AKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS
VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEEL
AGLMRDVLLRGKFESVQTASFLDH

BO24328.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-PA 368 CG3769-PA 1..368 1..368 1908 100 Plus