BO24343.complete Sequence
922 bp assembled on 2010-05-18
GenBank Submission: KX797021
> BO24343.complete
GAAGTTATCAGTCGACATGTTGATCGTACTACTGAGTGCTCTTGTGGCAC
CGTCAATTGTCAGTGCCGCATGTGGCCAGTGTGTGGATGCGCACAGTTGC
ATCGGTGAATCGGAGTTTCAGTTGTGCTACGATGGTGTCCGGGACCAGAC
TATCAACTACACTTGCCCCGAATCAAAACCCATTTGCACAACCTACGGAA
TTATTTGCATGCCCAACGGCACGAGTATAGAACGCGGCTGTGGTGATGTC
TCCAATTGTGGTGTTTGCTCAGAATCCACAACTTTTGCCTGTACTTCAAG
GACCACATTTGCTGTTTGCAACGGTGATGTTGTTTCCGCCAATAGTTTCG
ACTGTGCAGAAGACTTTGTCTGCAGTGTTAAAAATGCAGCCAGCGGAAGT
CCTTGTATTTCCCGGTGTGACTCATCAGACTCAGATATTTGTGATCGAGT
TTTGGAACCCGAAGTGGAAAGCACCACGGCATCAGTGACTCCCACTGTCA
CATCCACAGTCACTCCCATTGAGACTACTGCAGACCCATCCACAGTCATC
ACTGATTCATCGACAGGATCAACTGGGGATACCTCCACTGGATCGTCTTC
CGTAACTTCGTCGGACACATCAACGGACAGCACCGTGACTGTCACTGATT
CAGGAAGCACTACCCAAAGTACTGCAACAACTCCAGCATTCAATGAAGAC
ACCTATTGCCAAGAGATCAACTCAACGGGTCGCTATCCCATACCCAATGA
CACAGTGTGCACTAGCTACATCTACTGTGTTCTAAGGAGTGGAAGCTGGG
CAGGATTGCTCTATAATTGCAACGTGCAGAGACCTTATTTCGATGCTGAT
GTCTTCAGCTGTGGTACTGTGAAGCCATCTTATGCCGGATGCACTAATTT
AGTCGCAAGCTTTCTAGACCAT
BO24343.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:42:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34426-RA | 891 | CG34426-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34426-RA | 1022 | CG34426-RA | 9..897 | 16..904 | 4445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8802639..8803270 | 134..765 | 3160 | 100 | Plus |
| 3L | 28110227 | 3L | 8803334..8803474 | 764..904 | 705 | 100 | Plus |
| 3L | 28110227 | 3L | 8802471..8802591 | 16..136 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:42:51 has no hits.
BO24343.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:22 Download gff for
BO24343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34426-RA | 15..897 | 22..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:43 Download gff for
BO24343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34426-RA | 15..897 | 22..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:35 Download gff for
BO24343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34426-RA | 15..897 | 22..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:35 Download gff for
BO24343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8802477..8802589 | 22..134 | 100 | -> | Plus |
| 3L | 8802640..8803270 | 135..765 | 100 | -> | Plus |
| 3L | 8803336..8803474 | 766..906 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:43 Download gff for
BO24343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8795577..8795689 | 22..134 | 100 | -> | Plus |
| arm_3L | 8795740..8796370 | 135..765 | 100 | -> | Plus |
| arm_3L | 8796436..8796574 | 766..906 | 98 | | Plus |
BO24343.pep Sequence
Translation from 16 to 922
> BO24343.pep
MLIVLLSALVAPSIVSAACGQCVDAHSCIGESEFQLCYDGVRDQTINYTC
PESKPICTTYGIICMPNGTSIERGCGDVSNCGVCSESTTFACTSRTTFAV
CNGDVVSANSFDCAEDFVCSVKNAASGSPCISRCDSSDSDICDRVLEPEV
ESTTASVTPTVTSTVTPIETTADPSTVITDSSTGSTGDTSTGSSSVTSSD
TSTDSTVTVTDSGSTTQSTATTPAFNEDTYCQEINSTGRYPIPNDTVCTS
YIYCVLRSGSWAGLLYNCNVQRPYFDADVFSCGTVKPSYAGCTNLVASFL
DH
BO24343.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:52:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34426-PA | 296 | CG34426-PA | 1..296 | 1..296 | 1575 | 100 | Plus |
| CG13312-PA | 342 | CG13312-PA | 14..333 | 1..298 | 276 | 28.6 | Plus |
| CG34427-PB | 269 | CG34427-PB | 12..267 | 1..289 | 252 | 30.2 | Plus |
| CG42525-PB | 377 | CG42525-PB | 152..375 | 77..288 | 235 | 28.4 | Plus |
| CG42525-PA | 419 | CG42525-PA | 194..417 | 77..288 | 235 | 28.4 | Plus |
