BO24345.complete Sequence
1483 bp assembled on 2010-06-24
GenBank Submission: KX794101
> BO24345.complete
GAAGTTATCAGTCGACATGCCAATGCTGCCTACAATTGAGGAGGAGGCCA
AGTTGTCCTGGATCCGGCTAATGTGGAAATACCGCCTTCAGTTCCAGTCC
ATGGCCTCGGCGTCGATTGTTTTCGTGGGCTGTGGAATGCGTTTGGCCTG
GTCAATTTTCGATACTCCTGCTGGCAAATTCTTAAACAACCATAATACCC
ACAATCTGATGATGAGCTGGTTTATTGGAGCTGCCGTAGGCGCCCTATTG
GCAGCCCTATTTGTTCAGCGTGTCACCAAAAATGTGGCATATACCTCCAG
TGGCTTCCTGATGATTATAGCTGGCATTCTGAATGTAGTTCTTCCCCAGC
ATTTTCTGGCCGCCTGCTACAGTAGCGTCAGTGTTGGTGCAGCCTATGGG
CTAACCCAGATTCAGGCACTGGTCACTGGATCCGAGGTGGCACACAAATC
GATTCGAGGAATGCTCCTCAGCTGTGAGAAGATATTCCTGTGGCTGGGGG
TATGCATGCAGGTGTTCTACACTCGCGTGTGGCACAATTTGAGGCCACTG
GATACGCAAGGATACGAGATGCACATTGATCAGTTGCATGGAATGGTGTT
GGCCGGCCTGGGGCTGGGAGCTGTTATCCTGGCACTAGCTCATCGCCTGG
AGTCACCATTACTTCTGCTGCATCAGGAACGAGATATGGCTGTGGGTGAG
ACCCTGAAAGCTCTACACGGACAATCCACCACCGAGTTGGTAAGATTACG
GGAAGACTGCAGGCAACTGCACAGCGCTCGAGATTGGGAGCGTTTTGTTG
AGGAGCCGGAAGAATCGGTGGCCGATTGGAGAGTCTGGGCCCGACGTATC
CTGCCCTTTTTCAAGGTCCTGCTACTCAGATGCTTTGCTACCCTCGCCGT
GTCCTTGAGCTATAATCGAGCATTTGTGGTCGTCAGTTGGCATGGCCTCG
AATGCGATATGAACTGCATGTACTGGCTGGCATTCGCTGGCCTTATAGGC
AGTGTCCTGGGAGCCTTCGTAGTGGATTGGCAGGGACGCAGAAAAGTGTG
TTCCTTATCACTTTTCCTGGCAGGCGTTGTCATCGTGATGGTGGGTGGAG
TGTTCGATCACTTAGAATCTGTTAAGAGATCCTTCTATGACATTAATTTA
CTGGTCATTGCCCTTCTAATGCTGCTATTCGAAGTGATAGTAGCTGGGGG
CGTGGCTGTGCCCGCCCTAGTCTACACAGCCGAGGCCTTTAGCATAGCCC
ACAAGGCAAGATGCTTAGCTGGCATCCTAATCGTAGAGCAATTGCTCCAG
TTGGGTCTGCTTTTGGCCACCTTTGAGCACTACATCACTGTTTCTGTGTT
CTTTTTTACGATCGGTGTTTTTAGTTTTATTGTCGGCTTGACCGTATTTA
TGTTTATGCCAGAAACCAGGCAACTGACACTCTACGAGTGCCTGTTGAAG
TTCAAGAAAGTTCCTGCAAGCTTTCTAGACCAT
BO24345.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:53:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14160-RA | 1452 | CG14160-PA | 1..1449 | 17..1465 | 7245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:53:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14160-RA | 2112 | CG14160-RA | 266..1714 | 17..1465 | 7245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10087145..10088317 | 1465..293 | 5865 | 100 | Minus |
| 3L | 28110227 | 3L | 10088798..10088980 | 292..110 | 915 | 100 | Minus |
| 3L | 28110227 | 3L | 10089042..10089135 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:53:34 has no hits.
BO24345.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-24 11:46:14 Download gff for
BO24345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 266..1714 | 17..1467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:41 Download gff for
BO24345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 266..1714 | 17..1467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:47 Download gff for
BO24345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14160-RA | 266..1714 | 17..1467 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:47 Download gff for
BO24345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10087143..10088317 | 293..1467 | 99 | <- | Minus |
| 3L | 10088798..10088979 | 111..292 | 100 | <- | Minus |
| 3L | 10089042..10089135 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:41 Download gff for
BO24345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10080243..10081417 | 293..1467 | 99 | <- | Minus |
| arm_3L | 10081898..10082079 | 111..292 | 100 | <- | Minus |
| arm_3L | 10082142..10082235 | 17..110 | 100 | | Minus |
BO24345.pep Sequence
Translation from 16 to 1483
> BO24345.pep
MPMLPTIEEEAKLSWIRLMWKYRLQFQSMASASIVFVGCGMRLAWSIFDT
PAGKFLNNHNTHNLMMSWFIGAAVGALLAALFVQRVTKNVAYTSSGFLMI
IAGILNVVLPQHFLAACYSSVSVGAAYGLTQIQALVTGSEVAHKSIRGML
LSCEKIFLWLGVCMQVFYTRVWHNLRPLDTQGYEMHIDQLHGMVLAGLGL
GAVILALAHRLESPLLLLHQERDMAVGETLKALHGQSTTELVRLREDCRQ
LHSARDWERFVEEPEESVADWRVWARRILPFFKVLLLRCFATLAVSLSYN
RAFVVVSWHGLECDMNCMYWLAFAGLIGSVLGAFVVDWQGRRKVCSLSLF
LAGVVIVMVGGVFDHLESVKRSFYDINLLVIALLMLLFEVIVAGGVAVPA
LVYTAEAFSIAHKARCLAGILIVEQLLQLGLLLATFEHYITVSVFFFTIG
VFSFIVGLTVFMFMPETRQLTLYECLLKFKKVPASFLDH
BO24345.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14160-PA | 483 | CG14160-PA | 1..483 | 1..483 | 2487 | 100 | Plus |
| CG17930-PA | 502 | CG17930-PA | 56..496 | 20..482 | 348 | 27.8 | Plus |
| CG42826-PA | 473 | CG42826-PA | 19..467 | 12..481 | 325 | 26.7 | Plus |
| CG6901-PA | 485 | CG6901-PA | 42..478 | 23..481 | 278 | 24.3 | Plus |
| CG32054-PA | 563 | CG32054-PA | 109..557 | 14..481 | 276 | 24.6 | Plus |
