BO24346.complete Sequence
769 bp assembled on 2010-05-18
GenBank Submission: KX794033
> BO24346.complete
GAAGTTATCAGTCGACATGTACAGAACTTTGATATTTGCACCCTTTCTTT
TTCTCTGTGCCATAATAAATAACTTCAATTTGGTTAAGTCTGCGCTGCTT
TTCACCACAAACTCCGAGTATGGGATATTCATGGCCATATCGGTGCCGAT
TGGCTTGCCACATCGCAATGTCTTTCTGTCCTATAACTACGAGTTTAATT
ACTATCAACCGGAACACGTGTACAAATATCCACCGATTTTGATGGGTCAG
GACTTTGAGGACAGCTATCTCACATATCCGACAACTGGACGTGAGGCCGA
AGGGCGACACTGCCAGAATTGCACAGATTGGAAAATAGAGGGAAATATAA
ATAGCACCTCATCAAATAATAACTCAACTAAAGCTGCTTCGCGCGAAAAA
CGTGGTCTAACTCTGATGAGTCGCTCGGTATTTTATGCAATGCTAAGGGA
TAAATTAAGAAGGTCAGGGTTTCCAGCTGAACCCTGTTTGCTGCGCTTGA
TATGCGATACAAATGCTTCACAACTGGGTGAAGTTAATGGATTTTTAGGC
AGCCTCGTTCACATTATATTCAGTCCCAGCAGTTCCAAGGATGAGCACCT
GCCCAATGAGTATTACCAGGCCGAATGGGATGGTCGAGAGCAGCAGGAGT
GCTCCACGTATACCAAAAGTTGTGATCACAACATCTTGGACCTGGTTTCC
GTGTCACTGGAACAGTCTTTAAGCGATATTGTAAGCCGACGAGGGCGCAA
AGCAAGCTTTCTAGACCAT
BO24346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34442-RA | 738 | CG34442-PA | 1..735 | 17..751 | 3675 | 100 | Plus |
| CG34184-RA | 675 | CG34184-PA | 357..551 | 439..633 | 180 | 72.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34442-RA | 831 | CG34442-RA | 75..810 | 16..751 | 3680 | 100 | Plus |
| CG34184-RA | 715 | CG34184-RA | 397..591 | 439..633 | 180 | 72.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14367225..14367449 | 241..465 | 1125 | 100 | Plus |
| 2R | 25286936 | 2R | 14367674..14367853 | 572..751 | 900 | 100 | Plus |
| 2R | 25286936 | 2R | 14367040..14367163 | 124..247 | 605 | 99.2 | Plus |
| 2R | 25286936 | 2R | 14367500..14367612 | 461..573 | 565 | 100 | Plus |
| 2R | 25286936 | 2R | 14366872..14366980 | 16..124 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:43:02 has no hits.
BO24346.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:23 Download gff for
BO24346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34442-RA | 42..776 | 17..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:48 Download gff for
BO24346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34442-RA | 76..810 | 17..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:38 Download gff for
BO24346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34442-RA | 76..810 | 17..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:38 Download gff for
BO24346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14367676..14367853 | 574..753 | 98 | | Plus |
| 2R | 14366873..14366980 | 17..124 | 100 | -> | Plus |
| 2R | 14367041..14367157 | 125..241 | 100 | -> | Plus |
| 2R | 14367226..14367446 | 242..462 | 100 | -> | Plus |
| 2R | 14367502..14367612 | 463..573 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:48 Download gff for
BO24346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10254378..10254485 | 17..124 | 100 | -> | Plus |
| arm_2R | 10254546..10254662 | 125..241 | 100 | -> | Plus |
| arm_2R | 10254731..10254951 | 242..462 | 100 | -> | Plus |
| arm_2R | 10255007..10255117 | 463..573 | 100 | -> | Plus |
| arm_2R | 10255181..10255358 | 574..753 | 98 | | Plus |
BO24346.pep Sequence
Translation from 16 to 769
> BO24346.pep
MYRTLIFAPFLFLCAIINNFNLVKSALLFTTNSEYGIFMAISVPIGLPHR
NVFLSYNYEFNYYQPEHVYKYPPILMGQDFEDSYLTYPTTGREAEGRHCQ
NCTDWKIEGNINSTSSNNNSTKAASREKRGLTLMSRSVFYAMLRDKLRRS
GFPAEPCLLRLICDTNASQLGEVNGFLGSLVHIIFSPSSSKDEHLPNEYY
QAEWDGREQQECSTYTKSCDHNILDLVSVSLEQSLSDIVSRRGRKASFLD
H
BO24346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34442-PA | 245 | CG34442-PA | 1..245 | 1..245 | 1300 | 100 | Plus |
| CG34184-PA | 224 | CG34184-PA | 8..220 | 14..242 | 669 | 56.8 | Plus |
| CG34443-PA | 239 | CG34443-PA | 4..234 | 4..238 | 421 | 41.5 | Plus |
| CG34444-PA | 295 | CG34444-PA | 12..285 | 16..228 | 281 | 28.4 | Plus |
| CG14115-PA | 219 | CG14115-PA | 19..219 | 21..231 | 226 | 29.6 | Plus |
