BO24352.complete Sequence
1300 bp assembled on 2010-05-18
GenBank Submission: KX795575
> BO24352.complete
GAAGTTATCAGTCGACATGATGGAGACATTCCTCGTCCTGGGCCTGTGTT
TCATCCTGTACGAGGCATTGGATTTCTTTCAGGGCTGCATTCACAGTAAT
ACCCCATCGCCCAGCGATCAAATCGAAGCCTATCGCCGCGAACTCGACGA
ACAGCGCCAGCAGCAGCAGCAGGAACAATTCCTGGCAGGATTGACGCCGT
TGCTAGGCGCTCAATTTGCCGCTGCCGCCGCCGCCGCGGCTGCTGCCGCC
GGTTCGCAGTCGACGTTGGGCAGCACGACCACGCCCACCGCCTCCACGGC
CAGCGTGATAAGTGATTCATACGATCAGGAATCGCAATCGCAATCGCAAT
CTCAATCACAGTCCCAGTCGCAATCCAATCAAAATCAACAGCATTCGCTA
AGCACTCCTGGCCTGTTTCGTCCCGCCGCCTTGGGCTACTACGATCCGGA
GGATCCATTGCATGCCACAAACTCCCTACCGCGCGACTTTTACTATCTAC
AGCAGCAGCAGCTAAAGAACAAGGTCAGCTCAAGATCGCTACTCTCCAAG
TTCTCATCGACCAATTCGGATAATCGCATACATCCGGAGGCTGGAGCCGG
TTCAGGGCATCATCATAGCGTACTTGGAGCAGCGTCTGTTATAACAAGTC
AACCCTTACCATCTGGCGGTGAGATACCATCCAGTCTCTTCGATCAGCCG
GGACAACCGGCTGTGGTTGTGCCACCACTGCAATTGCAACCCTCATCACC
GCTATTTGTGGAGCTTAAGAGGGCGATTATAAGTCAGAATCAAAGATCAC
AACCGATAAAGTATCAGGCAAGAGAATCAATCGAAGAGCCACAGTGCCCT
CAGTGCGAGGAAGAGCAGATACAGTATTTGGCCGAGACTTTGGACGATCT
TGCCGAATCCGAAGATCAGCGGTATTCGCCAGCCGAAGAGGAGGACGACG
ACGACGACGAAGAGGAGGAGGAGGAGGAAGAGGAGCAGAACGAAGAGCAG
GAGGATCGGGAGGAGCAGCATCCCTACGTGGGAGGAGCTACCAGTGAGCC
AGATATTTGTGCCGCCACACGACAACAGCTAACCAGGATTCATCACATCG
CCATTGACGACATCGCCACCGGACAGGAGCATCATCATCATCATCATCAC
CATCTCAGCATTTCGGGACAGGCAACGTCGTTGGGCGCCAATTCTCACGC
AGACTTCAGGGAAATCGAGTGCGAGCGACTGCGACGCAAGTGCGTTAGCG
TTAAGCGCATCTATAGCATATCGGAAAAGTTCGCAAGCTTTCTAGACCAT
BO24352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-RB | 1269 | CG15465-PB | 1..1266 | 17..1282 | 6330 | 100 | Plus |
| CG15465-RA | 1269 | CG15465-PA | 1..1266 | 17..1282 | 6330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-RB | 19353 | CG15465-RB | 3189..4454 | 17..1282 | 6330 | 100 | Plus |
| CG15465-RA | 16076 | CG15465-RA | 533..1798 | 17..1282 | 6330 | 100 | Plus |
| rg-RR | 16076 | CG44835-RR | 533..1798 | 17..1282 | 6330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5175240..5176505 | 17..1282 | 6330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:43:45 has no hits.
BO24352.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:27 Download gff for
BO24352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15465-RA | 512..1777 | 17..1284 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:01 Download gff for
BO24352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rg-RJ | 2515..3780 | 17..1284 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:51 Download gff for
BO24352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rg-RR | 533..1798 | 17..1284 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:51 Download gff for
BO24352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5175240..5176505 | 17..1284 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:01 Download gff for
BO24352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5069273..5070538 | 17..1284 | 99 | | Plus |
BO24352.pep Sequence
Translation from 16 to 1300
> BO24352.pep
MMETFLVLGLCFILYEALDFFQGCIHSNTPSPSDQIEAYRRELDEQRQQQ
QQEQFLAGLTPLLGAQFAAAAAAAAAAAGSQSTLGSTTTPTASTASVISD
SYDQESQSQSQSQSQSQSQSNQNQQHSLSTPGLFRPAALGYYDPEDPLHA
TNSLPRDFYYLQQQQLKNKVSSRSLLSKFSSTNSDNRIHPEAGAGSGHHH
SVLGAASVITSQPLPSGGEIPSSLFDQPGQPAVVVPPLQLQPSSPLFVEL
KRAIISQNQRSQPIKYQARESIEEPQCPQCEEEQIQYLAETLDDLAESED
QRYSPAEEEDDDDDEEEEEEEEEQNEEQEDREEQHPYVGGATSEPDICAA
TRQQLTRIHHIAIDDIATGQEHHHHHHHHLSISGQATSLGANSHADFREI
ECERLRRKCVSVKRIYSISEKFASFLDH
BO24352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15465-PB | 422 | CG15465-PB | 1..422 | 1..422 | 2180 | 100 | Plus |
| CG15465-PA | 422 | CG15465-PA | 1..422 | 1..422 | 2180 | 100 | Plus |
