BO24353.complete Sequence
1003 bp assembled on 2010-05-18
GenBank Submission: KX793855
> BO24353.complete
GAAGTTATCAGTCGACATGGCAGCGCAGCTGAATCCATTCCGCAATGCCT
TCCGGCTGCCGTCCAAGCAGCGCATCAACTGGTTTCCCGGCCACATGACC
AAGGGTATGCGGCAAATTCAGCAAAAACTACGAAATGTAGACTGCATAGT
CGAGATTCACGATGCACGCATCCCATTGGCGGGCAGAAACTCCCAGTTCT
TTGACACAATCACCGGAAGTGGTGTTAAACCGCATATTCTGGTGCTGAAC
AAAGTCGATCTGCTGGGCGCCAAACAGCAGAAGAGCGTGCTCCAGCAGCT
GAGGAGACAGCAGCCCGAACTGCAGCACATCCTGTTCACCAACTGCAAGG
ATCAGCGCAACAACGGCGTGCTGGACATCCTGCCCCTGGCAACGCGCCTC
GTGAGCGAGAGCAGTCGCTTCAATCGCACCCAAGCTGCCGAGCACAATCT
GATGATCATCGGCGTGCCCAATGTGGGCAAGAGTTCCGTGATCAATGTGC
TGCGAAATGTGCATCTCAAGAAGAAGAGCGCCGCACGCGTGGGTGCCGAG
GCGGGTATAACTCGATCCGTCGGCGAACGCATCAAAATCCAAGAGAATCC
GCCTGTTTACATGATCGACACACCCGGCATCCTCCAGCCCTCCATTAAGG
ATGATGAAATGGGCATGAAACTGGCCCTGGTGGGCTGCCTTCCCGATCAT
ATTGTGGGCGAGGATCTGATAGCCGACTATCTGCTGTACTGGCTGAATAG
CCACCGCAAATACGACTACGTGGAGATGCTAAAGCTCAGCTCCGGACCCA
GTGACGACATCAGCGCCGTGCTGGCGGAGTACGCTCATCGGGAGGAGCTA
TTCCACAAGGTCAAGCAGTACGACGGACGCGTGGAGGTGATGACAAATTT
ATTGGCGGCCGCGCGAAAGTTCATTCACTTCTTTCGCTCCGGCCAGTTGG
GTCACATGAATCTGGACGAACCCAGTGGTTTCAGAGCAAGCTTTCTAGAC
CAT
BO24353.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17141-RA | 972 | CG17141-PA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17141-RA | 1099 | CG17141-RA | 73..1042 | 16..985 | 4850 | 100 | Plus |
| HP1c-RA | 986 | CG6990-RA | 884..986 | 985..883 | 515 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22746503..22747273 | 985..215 | 3855 | 100 | Minus |
| 3R | 32079331 | 3R | 22747327..22747527 | 216..16 | 1005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:43:51 has no hits.
BO24353.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:28 Download gff for
BO24353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17141-RA | 31..999 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:03 Download gff for
BO24353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17141-RA | 74..1042 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:53 Download gff for
BO24353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17141-RA | 74..1042 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:53 Download gff for
BO24353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22746499..22747272 | 216..987 | 99 | <- | Minus |
| 3R | 22747328..22747526 | 17..215 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:03 Download gff for
BO24353.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18572221..18572994 | 216..987 | 99 | <- | Minus |
| arm_3R | 18573050..18573248 | 17..215 | 100 | | Minus |
BO24353.pep Sequence
Translation from 16 to 1003
> BO24353.pep
MAAQLNPFRNAFRLPSKQRINWFPGHMTKGMRQIQQKLRNVDCIVEIHDA
RIPLAGRNSQFFDTITGSGVKPHILVLNKVDLLGAKQQKSVLQQLRRQQP
ELQHILFTNCKDQRNNGVLDILPLATRLVSESSRFNRTQAAEHNLMIIGV
PNVGKSSVINVLRNVHLKKKSAARVGAEAGITRSVGERIKIQENPPVYMI
DTPGILQPSIKDDEMGMKLALVGCLPDHIVGEDLIADYLLYWLNSHRKYD
YVEMLKLSSGPSDDISAVLAEYAHREELFHKVKQYDGRVEVMTNLLAAAR
KFIHFFRSGQLGHMNLDEPSGFRASFLDH
BO24353.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17141-PA | 323 | CG17141-PA | 1..323 | 1..323 | 1667 | 100 | Plus |
