Clone BO24356 Report

Search the DGRC for BO24356

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:243
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG30259-RB
Protein status:BO24356.pep: Imported from assembly
Sequenced Size:463

Clone Sequence Records

BO24356.complete Sequence

463 bp assembled on 2010-05-18

GenBank Submission: KX795572

> BO24356.complete
GAAGTTATCAGTCGACATGGGCAAAAAGGGTAAAGGAAAAGGCAACAAAT
TGGCCAACATGTCCGAGGAGGAGCGGGCCAGGTATTTGCAAATGAGGGCC
GACATGGAGGAAGAGACGAGGCGGCGGAAAATGCAGCTCATTTCCATGTA
CATGAAGAACAAACTGAAAAGAGAGGATGCTTTTGGTCGACTCAATATGG
CTAAAATCAACCAGGAGTGGCGGAGCATTTTGCGCCAGGTGAAAATCCAG
GAGCTGCGCCGCGAAATCGTCGATGTGGAGTCTTTCTTTCAGGAGGCACT
TAAGCGCAAGGACCAGGTGATCCATCGCCTCATTGCTCACATAGAATCCA
CCGAGGATATGTACGCCAATCTGCAGCAGTCACACATGGAGAATATCACC
AGGATAGTTGGTACGATTGGGATAACATCCTTAAAAATAACATTTGCAAG
CTTTCTAGACCAT

BO24356.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG30259-RA 1623 CG30259-PA 1..398 17..414 1975 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG30259-RA 1771 CG30259-RA 49..447 16..414 1980 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22703900..22704189 445..156 1450 100 Minus
2R 25286936 2R 22704258..22704399 157..16 710 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:44:14 has no hits.

BO24356.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:33 Download gff for BO24356.complete
Subject Subject Range Query Range Percent Splice Strand
CG30259-RB 50..478 17..447 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:12 Download gff for BO24356.complete
Subject Subject Range Query Range Percent Splice Strand
CG30259-RA 50..457 17..423 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:59 Download gff for BO24356.complete
Subject Subject Range Query Range Percent Splice Strand
CG30259-RA 50..457 17..423 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:59 Download gff for BO24356.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22703898..22704187 158..447 99 <- Minus
2R 22704258..22704398 17..157 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:12 Download gff for BO24356.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18591403..18591692 158..447 99 <- Minus
arm_2R 18591763..18591903 17..157 100   Minus

BO24356.pep Sequence

Translation from 16 to 463

> BO24356.pep
MGKKGKGKGNKLANMSEEERARYLQMRADMEEETRRRKMQLISMYMKNKL
KREDAFGRLNMAKINQEWRSILRQVKIQELRREIVDVESFFQEALKRKDQ
VIHRLIAHIESTEDMYANLQQSHMENITRIVGTIGITSLKITFASFLDH

BO24356.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG30259-PA 540 CG30259-PA 1..133 1..133 661 99.2 Plus