BO24364.complete Sequence
958 bp assembled on 2010-05-18
GenBank Submission: KX793988
> BO24364.complete
GAAGTTATCAGTCGACATGCCTTGCAGAGTCGGTGATATGGATTCTATTT
CCGCACGGTTTCAGCCCAGTGTAAGAATTGGCAATTGGGTCGAAGAAAAT
TGCCTTGAAGAGGACAAAATAGTAAACTTTAAGAAACAACGCGATCGCGG
CGAACTTTTAGTGGAAAAGGCGCGCACTTTGTATGATAATTTCCACAAGG
AGATCGTTTTGGCTGCTCCCAAGCAAACCATTATATTCGGGGCTATTGTG
CAATTAATGCCCATCCATATAAATATCAGTGATATGGATACAACCGATTT
GAATGCCGCTTTATCGGTGGTGATCAACGAAAAGGTGGTGCGAAAAAGCC
AGTCAATCAATGAGGATTGTGAGCTATCCGTGGCGCCCTCGAAGCGGCCT
TGTGTGCGAAACTCCTTTAAAATAGTCAGTGGAGATGGTCGGGATCGCAC
TGGTGAGAATATCAAATATGGACAGCGATTCCAGCTGCAGTGCATGGCCT
CGGAACACGATCCCATAGTACTGTACAGTGGGCCCAAGCGGTGCAATCTG
CAGCAGGGTGTCCATGCCACCTATTTGTCGCACAAAAACGGGGAGCTCAA
TCTCAACCTGGGACTTGTGCACCGCAGTAAATTATCATGCCCGGACAACG
ATATACCCATAGCATACACGAATTGGTTCTGCAGACATGTAAATCCAAAG
CAGCGTTTTGAAAGCGAAGGAGAAGATATACCTAGCAATTCCCCTTTGGT
AATCGTGCATGCGACCACAAATCGAAATCTAGCTGCCGAGAATGTTCTGA
TCCAAACCCTTTTTGGTCCCGAATTTCTGGTGTCCGTGCAAAACTATCGC
AATATCTACAGGCATGAGATTTGGAAGAACGTATGGATGATTAGCAACGG
ACACCAGACTGGATCAAAGTCTGCAAATTCTACGTCTCACGCAAGCTTTC
TAGACCAT
BO24364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34457-RB | 927 | CG34457-PB | 1..924 | 17..940 | 4620 | 100 | Plus |
| CG34457-RA | 927 | CG34457-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34457-RB | 1267 | CG34457-RB | 88..1011 | 17..940 | 4620 | 100 | Plus |
| CG34457-RA | 1339 | CG34457-RA | 160..1083 | 17..940 | 4620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16670638..16671155 | 111..628 | 2590 | 100 | Plus |
| 2R | 25286936 | 2R | 16671374..16671580 | 734..940 | 1035 | 100 | Plus |
| 2R | 25286936 | 2R | 16671214..16671318 | 629..733 | 525 | 100 | Plus |
| 2R | 25286936 | 2R | 16670485..16670581 | 17..113 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:42 has no hits.
BO24364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:40 Download gff for
BO24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34457-RA | 160..1083 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:24 Download gff for
BO24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34457-RA | 160..1083 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:08 Download gff for
BO24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34457-RA | 160..1083 | 17..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:08 Download gff for
BO24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16670485..16670580 | 17..112 | 100 | -> | Plus |
| 2R | 16670640..16671155 | 113..628 | 100 | -> | Plus |
| 2R | 16671214..16671318 | 629..733 | 100 | -> | Plus |
| 2R | 16671374..16671580 | 734..942 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:24 Download gff for
BO24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12557990..12558085 | 17..112 | 100 | -> | Plus |
| arm_2R | 12558145..12558660 | 113..628 | 100 | -> | Plus |
| arm_2R | 12558719..12558823 | 629..733 | 100 | -> | Plus |
| arm_2R | 12558879..12559085 | 734..942 | 99 | | Plus |
BO24364.pep Sequence
Translation from 16 to 958
> BO24364.pep
MPCRVGDMDSISARFQPSVRIGNWVEENCLEEDKIVNFKKQRDRGELLVE
KARTLYDNFHKEIVLAAPKQTIIFGAIVQLMPIHINISDMDTTDLNAALS
VVINEKVVRKSQSINEDCELSVAPSKRPCVRNSFKIVSGDGRDRTGENIK
YGQRFQLQCMASEHDPIVLYSGPKRCNLQQGVHATYLSHKNGELNLNLGL
VHRSKLSCPDNDIPIAYTNWFCRHVNPKQRFESEGEDIPSNSPLVIVHAT
TNRNLAAENVLIQTLFGPEFLVSVQNYRNIYRHEIWKNVWMISNGHQTGS
KSANSTSHASFLDH
BO24364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34457-PB | 308 | CG34457-PB | 1..308 | 1..308 | 1628 | 100 | Plus |
| CG34457-PA | 308 | CG34457-PA | 1..308 | 1..308 | 1628 | 100 | Plus |
| CG15498-PA | 281 | CG15498-PA | 2..277 | 15..290 | 701 | 47.3 | Plus |
