BO24365.complete Sequence
1273 bp assembled on 2010-05-18
GenBank Submission: KX793920
> BO24365.complete
GAAGTTATCAGTCGACATGTACAATTTGATAAAAAGTCGCACACTCTCCG
ACTACTTAAAGAAGCCAATGCCGCCAAATTCTTTGAATAATGGCGGCAAA
ACAAACAATTCCGTGGGTAATACCAACAATCCGGCCGGAAATCTAAGTCC
TGTTGCCGAAGAATGTGTGCCGCATCCAAAGAACAAAGAGCGTACGCTCG
TTGAGGATTTGGCCAAAATAAATAAACTGTTCGAGTATCTGGAGGCTTCA
GCTACGGACGATATGGATTTAGATAATTCAACTGTCGAGGATGTGGGAAA
GGAAAGTTTATCGAATACGGTGCAGGCATGGAAAGAAGTTCCCAATATAA
AAAATAAATATTTTATCGGAGAACAGGTGCCTGTGATGGATACTTCCGAC
TTTATGCTTATTTCTCGCAACAAGGCAAAGAAGACTTTGCGTGCCAGGCA
AATGCGTCTTGAGCAGGAAAGAAAGGTGGCTCTGGAAGCCGCGAAATTGA
CCGAACAAAAAGGCATGGGGGATCCTTCTTCGGTTCCAGGCAACGATAGC
AACGATAATGAAGCCCAGCCAGTTGTGCATCTGTCTCGTTCGCCCATCAA
ATATTCTATGGATGAACGCACTGGAGTCAATCGCATGCGAGCCACCAAAA
AGAAGCAGATCGAGCGTGCTCTTTTCTCTGAGAATTCGATGCAATTGGAT
CAGGAGCAGATGCAACTAGCTGTCGAAGAAGACGAAAACCAAAAGGCTGA
CGGTCCGGTGGCCGCTTTGACTCACAAAAGATATATACCCACCCACAAGG
AATGGGAAGAGCAGCGTCGTCTTAAAGCCGAAAACTCGCAAACCACAGTG
GACCAGATGACTCCGGCCACCACGATGACCGCCAAAAGATACATACCCAC
CACCAAGGAATGGGACGAACAGCGTCGTTTCAAGCTTAAGGCCAAGATGG
AAACTAAAAAGAACGCCACTTCGGCCAATTCAACTAACGAACTTGGGGCG
GAGAAACGCAAAGGGAATAGCACTCATTATGGAGCAAATATTGATTGGAC
AAACTTAACTCGTACAAATAATAATTTTCAAAAGATGGCAAGTCAGCCAA
TGCCAATTGAAGGCGAGCAGAAAGATCGTCAAGTGAAGAAAGGAAATGTT
ATACGTTATACTATTGATGAATTGCTGAAGTTGGAACCGCAACCAGACGA
TCTTGATGTGCCTGCTGAAGTTGCCTTGATTGATAAAAAGTTACTGAAGG
GCAATGCAAGCTTTCTAGACCAT
BO24365.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9777-RA | 1242 | CG9777-PA | 1..1239 | 17..1255 | 6195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9777-RA | 1499 | CG9777-RA | 91..1330 | 16..1255 | 6200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16630842..16631737 | 1255..360 | 4480 | 100 | Minus |
| X | 23542271 | X | 16631802..16632145 | 359..16 | 1720 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 5132..5211 | 415..327 | 136 | 67.4 | Minus |
BO24365.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:24:41 Download gff for
BO24365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9777-RA | 92..1330 | 17..1257 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:27 Download gff for
BO24365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9777-RA | 92..1330 | 17..1257 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:10 Download gff for
BO24365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9777-RA | 92..1330 | 17..1257 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:10 Download gff for
BO24365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16630840..16631737 | 360..1257 | 99 | <- | Minus |
| X | 16631802..16632144 | 17..359 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:27 Download gff for
BO24365.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16524873..16525770 | 360..1257 | 99 | <- | Minus |
| arm_X | 16525835..16526177 | 17..359 | 100 | | Minus |
BO24365.pep Sequence
Translation from 16 to 1273
> BO24365.pep
MYNLIKSRTLSDYLKKPMPPNSLNNGGKTNNSVGNTNNPAGNLSPVAEEC
VPHPKNKERTLVEDLAKINKLFEYLEASATDDMDLDNSTVEDVGKESLSN
TVQAWKEVPNIKNKYFIGEQVPVMDTSDFMLISRNKAKKTLRARQMRLEQ
ERKVALEAAKLTEQKGMGDPSSVPGNDSNDNEAQPVVHLSRSPIKYSMDE
RTGVNRMRATKKKQIERALFSENSMQLDQEQMQLAVEEDENQKADGPVAA
LTHKRYIPTHKEWEEQRRLKAENSQTTVDQMTPATTMTAKRYIPTTKEWD
EQRRFKLKAKMETKKNATSANSTNELGAEKRKGNSTHYGANIDWTNLTRT
NNNFQKMASQPMPIEGEQKDRQVKKGNVIRYTIDELLKLEPQPDDLDVPA
EVALIDKKLLKGNASFLDH
BO24365.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9777-PA | 413 | CG9777-PA | 1..413 | 1..413 | 2132 | 100 | Plus |
| CG6304-PB | 422 | CG6304-PB | 46..409 | 76..410 | 306 | 29.6 | Plus |
| CG6304-PA | 422 | CG6304-PA | 46..409 | 76..410 | 306 | 29.6 | Plus |
