BO24391.complete Sequence
2056 bp assembled on 2010-06-28
GenBank Submission: KX795114
> BO24391.complete
GAAGTTATCAGTCGACATGGCATCTTGCAAGCCGCTTTCCGTAAAACTAA
AACTCCCAAATCGTGTCCAACCCGAGTTTATACCGCATCCCGGAATGGCG
GGTCGTTATACCAATAAGTTGCATTACTTCAAGAAGCATTTGCTCGACGA
GGCTCGCAAGAAGAAGTATGCCTTGGACTTCTTGGAGCCCGTGGACACGG
AGGCTCTGATGGTGCCCACATACTACACGGTTATCCATCGTCCCATGGAT
ATCGGTACCATTGTGAAAAGAGTTCAGAACAACTACTATAAATCTGTCAA
TGAAGCGATTGCCGATTTCAAGCAAATTATTAGCAATTGCTTCCTATTCA
ATCGATCCGGCGATGTCGTTTACCGCAAGGGCCAGATGCTGGAGAAGTTC
TTTCACAAGAAACTCCGAGGCATGCCGTCTGGTCCAGAGGTGCCCTGCAA
TAGGGATCCCAAGGCGGTGGGCAGGCCTAGGACCAATGCTCCTAGTTCCG
CGCAGACGGAACGCAAGTGCCGGGAATTATTGAAGAAGTTGCAGAGCATC
ACCAATCAGACAGATGCCATGACGCGCAATTTCTTCAGTAACAAGTGGGA
TTCGTTGCAAAAGAAAGTTGATCGCCAGTACTTCAAGTCTGTCAATGAAT
TTTGCTTGCATGTGGATGGCTGCTTTAGAAAGTACCACGAACCGGCTAAA
ATCCTCTACGAAAGAGTCTTTAATCAGCCGGCGGCTTGGTGTACTTCCAT
GAATGGAAACTCATCGCTGGAATCTGCTTTGAATGCCGCAGATCTAAATG
AACTACTGGCTGCCGCCAAGTTAACGGTAAATAGCTTGATGCAGTGCGTC
CAAATGCCCGGTTCCGGGGAACCTCTGACAGCCAAGAGTTTGGTGGAGAC
TTTCTGTGACACCTTAAACAAGATGATAAACAAAATGGAGGCAGGTCAAC
GAAATTCTCCAAACCCATCATCTAGCAAACGACAGAAGATGAGCCCCGAG
CAGGAAACGGATTTGGTCCAAGGCGAATTTAAGCCAGCTATGGAGTTGTT
AAGTGGAAATGAAATAGATAACCTCATGGCAGTTAGCATTGAATCCTCAG
ATGATGAAGCTATCGATGCCTCAATGCGTATCACTGACGCGGATCGATGT
GCCACACAGAAATTATTTGCCAAGCTTCCGACAAACGCCATGAAGGAGAT
AATTCACATGGTCCAGCAAATCGAAGGATTTTCCTCAGAGAACTGTGGAG
ATCTGAGCTTCGATGTCAAAGGTCTCGCCACGGATACTATGATCATGATG
AAAAGTGCCGTCACCAAGGCAACTAGGGCCCATAGCAAGCTGAAGCTCAA
GGACATGCAGCCTTCGGAAAAGGAAGGACTTCAGCGGGCACTGCAGTCGC
AGCTGGTGAACATTACACGGATGCTCAACAAAAATCGTCGCCGATGTGGT
CCCTTGATCAATTTCAGGAATAAAAACAACACTGCCAATAACGTGGTGCG
TAAGAGAGCAACTGCTCCGCTAACCGCCAAATTGAAGCCGCTACAGGCTA
ATGTAATGGCTCCACAATTGGGAGCAGGTGTTGTTGAGACTCACAATCTG
AGCGATACCAGCGACGATGACGTCTCCGCTCCGGTAAAACTGTCGGCTAT
TGGTGGCACTCCAATGAGGAATCTCCCAATAAATAGTAATCCTTTGCAAA
TGCAACCCATCAGATCCCCCCCCAAGTTGCCACACGTTGTCGAACTCCAG
ATGAGCAGCAGCAGCAGCAGCGAGTCGGAAATGAAATCCAAGTCCGGCAG
ACTTTCTAGGTCCAGGTCCAGGTCCATGTCCGACACCAAGTTGAGACCCA
GGTCAAACTCCAGCGCCAGCTCTAGATCTAACTCTAGTTCTAGCTCTGGC
TCCAACGCTGGCTCCAGCTCAGGGTCGCGCTCCAGATCAAGCTCCAGTTC
CAGTTCATCTTCGAACAACAGCTCCGAGTCCAACGATTCCTCTGACGTTG
AAGTGGTCCCCAATGTACCCGAAGGACAGCTGAGGGCCGCAAGCTTTCTA
GACCAT
BO24391.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7229-RA | 2025 | CG7229-PA | 1..2022 | 17..2038 | 10110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:48:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7229-RA | 2332 | CG7229-RA | 156..2178 | 16..2038 | 10115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19260121..19262140 | 19..2038 | 10100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:48:33 has no hits.
BO24391.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 11:10:00 Download gff for
BO24391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7229-RA | 152..2173 | 17..2040 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:00 Download gff for
BO24391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7229-RA | 157..2178 | 17..2040 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:21 Download gff for
BO24391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7229-RA | 157..2178 | 17..2040 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:21 Download gff for
BO24391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19260120..19262140 | 17..2040 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:00 Download gff for
BO24391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15147625..15149645 | 17..2040 | 99 | | Plus |
BO24391.pep Sequence
Translation from 16 to 2056
> BO24391.pep
MASCKPLSVKLKLPNRVQPEFIPHPGMAGRYTNKLHYFKKHLLDEARKKK
YALDFLEPVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIAD
FKQIISNCFLFNRSGDVVYRKGQMLEKFFHKKLRGMPSGPEVPCNRDPKA
VGRPRTNAPSSAQTERKCRELLKKLQSITNQTDAMTRNFFSNKWDSLQKK
VDRQYFKSVNEFCLHVDGCFRKYHEPAKILYERVFNQPAAWCTSMNGNSS
LESALNAADLNELLAAAKLTVNSLMQCVQMPGSGEPLTAKSLVETFCDTL
NKMINKMEAGQRNSPNPSSSKRQKMSPEQETDLVQGEFKPAMELLSGNEI
DNLMAVSIESSDDEAIDASMRITDADRCATQKLFAKLPTNAMKEIIHMVQ
QIEGFSSENCGDLSFDVKGLATDTMIMMKSAVTKATRAHSKLKLKDMQPS
EKEGLQRALQSQLVNITRMLNKNRRRCGPLINFRNKNNTANNVVRKRATA
PLTAKLKPLQANVMAPQLGAGVVETHNLSDTSDDDVSAPVKLSAIGGTPM
RNLPINSNPLQMQPIRSPPKLPHVVELQMSSSSSSESEMKSKSGRLSRSR
SRSMSDTKLRPRSNSSASSRSNSSSSSGSNAGSSSGSRSRSSSSSSSSSN
NSSESNDSSDVEVVPNVPEGQLRAASFLDH
BO24391.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7229-PA | 674 | CG7229-PA | 1..674 | 1..674 | 3440 | 100 | Plus |
| fs(1)h-PH | 1105 | CG2252-PH | 21..167 | 17..164 | 265 | 37.2 | Plus |
| fs(1)h-PF | 1110 | CG2252-PF | 21..167 | 17..164 | 265 | 37.2 | Plus |
| fs(1)h-PE | 1110 | CG2252-PE | 21..167 | 17..164 | 265 | 37.2 | Plus |
| fs(1)h-PD | 1110 | CG2252-PD | 21..167 | 17..164 | 265 | 37.2 | Plus |
| fs(1)h-PH | 1105 | CG2252-PH | 482..583 | 42..140 | 169 | 35.3 | Plus |
| fs(1)h-PF | 1110 | CG2252-PF | 487..588 | 42..140 | 169 | 35.3 | Plus |
| fs(1)h-PE | 1110 | CG2252-PE | 487..588 | 42..140 | 169 | 35.3 | Plus |
