BO24476.complete Sequence
2035 bp assembled on 2010-06-28
GenBank Submission: KX794501
> BO24476.complete
GAAGTTATCAGTCGACATGTATGGAATGCTGTATGAGAGTGTGCAGCACT
ACGTGCAGGAGGAGTATGGCGTGGACATTTGGCGGAAGGTGTGTCACATC
ATCGACTGCAAGCACAATAGCTTCAAGACGCACCAGATCTATCCGGACAA
GCTGATGCCGGATATCGCCGAGGCTTTGTCCGCCTGCACGGGCGAGTCCT
TCGACTTCTGCATGAACTTCTTCGGGCGCTGTTTTGTGCGATTCTTCAGC
AACTTCGGCTACGACAAGATGATCCGCTCCACCGGGCGATACTTCTGCGA
CTTCCTGCAGTCCATCGACAACATTCACTTGATTATGCGTTTCACCTATC
CCAAGATGAAGTCGCCCAGCATGCAGTTGACCAATATGGATGATAACGGA
GCTGTGATCCTATACAGAAGCAGTCGCACTGGAATGTCCAAGTACCTAAT
TGGGCAGATGACCGAGGTGGCCCGCGAGTTTTACGGCCTGGAGATCAAGG
CTTACGTGATCGAGAGCCAGAATGACATCAGTGGAGGCACTGCTGGTCCC
ATCAAGCTCACGGATGGTCCCTTGACCGTGATTGTGAAGTATCGTCTGGA
CTTTGATAACCGGGAGTACATGGCCAAGCGCGTCAATACGGAGGCCCATC
CCTCACAGCTCAAAATGCCCACCGTGAAACTGGATGTGTTCCTCGATCTT
TTTCCCTTCACATTTGTGCTGAACCACGACATGAAGATCACGCATGCTGG
TGAGAAGATCGTTGAGACCTGGATTATGCACAATCCAGGGGCCAATCCAA
AGAGCTTCATTGGCACCCACGTAATGGACTTGTTCCAATGCCGTCGTCCG
AAAGACACCACTATCGACTGGGATACCCTGATCCAGATGAGAGCCGTGCT
CTTTGAGTTCGAGTTGATTCGCACGGGTCACAATCGCGCTGCCTACGATG
CTGTCTTAAACATGGACTTTGAGAACTATGACGAGATGGACTTAAACGAA
GCCCAAACTATGGCGCTGGCCAAGGCTCAGGAGTTCAGTGAATCCCATCC
GGTGGATGATGATGAATCTGCGAGAGAGGATGAGATCGACCCTGCCACTG
GGGAACGTCGATCTTCCCAGGGCTTGAGGTCCATCCTTTTGAAGGGACAG
ATGTTCTACATCAAAGATGTGGACTCGCTGATCTTCCTGTGCAGTCCTCT
AATCGAAAATCTCGATGAGCTGCATGGAATCGGTCTCTATTTGAACGATC
TTAATCCACATGGACTGAGTAGAGAGCTTGTGATGGCGGGATGGCAGCAC
TGCTCCAAGCTGGAGATCATGTTTGAAAAGGAGGAGCAGCGATCGGATGA
GCTGGAAAAATCGCTGGAGCTGGCAGATTCCTGGAAGCGGCAGGGGGATG
AGCTGCTCTACTCCATGATTCCGCGGCCCATTGCCGAAAGAATGCGACTC
AGCGAAGAACAGGTTTGCCAGAGTTTCGAGGAAGTGTCCGTCATCTTCCT
CGAGGTGATGAACGTCTATGATGAAGGATTGAACAGCATTCAGGGAGCTA
TGCAGACGGTGAACACTTTGAACAAAGTATTTTCCGCTCTGGATGAGGAG
ATCATTTCCCCATTCGTTTACAAAGTGGAGACCGTGGGCATGGTTTACAT
GGCTGTTTCGGGTGCTCCTGATGTGAATCCCCTGCACGCCGAACACGCCT
GCGATTTGGCCTTAAGGGTGATGAAAAAGTTCAAGGCTCACGATATGGGG
GACGTGGCTATTCGAGTTGGCATCAATTCGGGACCTGTGGTGGCTGGCGT
TGTGGGCCAAAAGGTTCCTCGATACTGTCTGTTTGGGGACACCGTTAACA
CCGCCTCGCGAATGGAGAGCAGCAGTGATCCCTGGAAGATCCAGCTATCG
AAGTACACCGGCGATAAAGTGCGCCAAGTGGGCTACAAAGTGGAGTCGCG
TGGTACGGTCCAGGTCAAAGGCAAGGGCGACATGGAGACCTACTGGCTGC
TGGAGGGTCCCGAGGGCGCAAGCTTTCTAGACCAT
BO24476.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:48:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gyc-89Da-RC | 2004 | CG14885-PC | 1..2001 | 17..2017 | 10005 | 100 | Plus |
| Gyc-89Da-RB | 2004 | CG14885-PB | 1..2001 | 17..2017 | 10005 | 100 | Plus |
| Gyc-89Db-RA | 2010 | CG14886-PA | 1126..2007 | 1133..2014 | 2595 | 86.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:48:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gyc-89Da-RC | 2339 | CG14885-RC | 231..2232 | 16..2017 | 10010 | 100 | Plus |
| Gyc-89Da-RB | 2274 | CG14885-RB | 166..2167 | 16..2017 | 10010 | 100 | Plus |
| Gyc-89Db-RA | 2784 | CG14886-RA | 1666..2547 | 1133..2014 | 2595 | 86.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16473369..16475370 | 16..2017 | 10010 | 100 | Plus |
| 3R | 32079331 | 3R | 16479952..16480833 | 1133..2014 | 2595 | 86.3 | Plus |
| 3R | 32079331 | 3R | 16478826..16479791 | 16..981 | 2325 | 82.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:48:45 has no hits.
BO24476.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 11:10:03 Download gff for
BO24476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyc-89Da-RC | 232..2232 | 17..2019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:04 Download gff for
BO24476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyc-89Da-RB | 167..2167 | 17..2019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:25:23 Download gff for
BO24476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyc-89Da-RB | 167..2167 | 17..2019 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:25:23 Download gff for
BO24476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16473370..16475370 | 17..2019 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:04 Download gff for
BO24476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12299092..12301092 | 17..2019 | 99 | | Plus |
BO24476.pep Sequence
Translation from 16 to 2035
> BO24476.pep
MYGMLYESVQHYVQEEYGVDIWRKVCHIIDCKHNSFKTHQIYPDKLMPDI
AEALSACTGESFDFCMNFFGRCFVRFFSNFGYDKMIRSTGRYFCDFLQSI
DNIHLIMRFTYPKMKSPSMQLTNMDDNGAVILYRSSRTGMSKYLIGQMTE
VAREFYGLEIKAYVIESQNDISGGTAGPIKLTDGPLTVIVKYRLDFDNRE
YMAKRVNTEAHPSQLKMPTVKLDVFLDLFPFTFVLNHDMKITHAGEKIVE
TWIMHNPGANPKSFIGTHVMDLFQCRRPKDTTIDWDTLIQMRAVLFEFEL
IRTGHNRAAYDAVLNMDFENYDEMDLNEAQTMALAKAQEFSESHPVDDDE
SAREDEIDPATGERRSSQGLRSILLKGQMFYIKDVDSLIFLCSPLIENLD
ELHGIGLYLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDELEKSL
ELADSWKRQGDELLYSMIPRPIAERMRLSEEQVCQSFEEVSVIFLEVMNV
YDEGLNSIQGAMQTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGA
PDVNPLHAEHACDLALRVMKKFKAHDMGDVAIRVGINSGPVVAGVVGQKV
PRYCLFGDTVNTASRMESSSDPWKIQLSKYTGDKVRQVGYKVESRGTVQV
KGKGDMETYWLLEGPEGASFLDH
BO24476.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gyc-89Da-PC | 667 | CG14885-PC | 1..667 | 1..667 | 3509 | 100 | Plus |
| Gyc-89Da-PB | 667 | CG14885-PB | 1..667 | 1..667 | 3509 | 100 | Plus |
| Gyc-89Db-PA | 669 | CG14886-PA | 1..669 | 1..666 | 3012 | 85.2 | Plus |
| Gyc88E-PF | 1090 | CG4154-PF | 1..594 | 1..663 | 900 | 33.4 | Plus |
| Gyc88E-PE | 1097 | CG4154-PE | 1..594 | 1..663 | 900 | 33.4 | Plus |
