Clone BO24507 Report

Search the DGRC for BO24507

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG34456-RA
Protein status:BO24507.pep: Imported from assembly
Sequenced Size:535

Clone Sequence Records

BO24507.complete Sequence

535 bp assembled on 2010-05-18

GenBank Submission: KX797482

> BO24507.complete
GAAGTTATCAGTCGACATGTGGCTGTCGCTTATCTTTATTGCCTGTCTAG
CCGGCGCAAGCAGTGGCGACGAGAAGATCCCGGTGGAGCAGGGATTTGTG
CCCCGCTACACTCCGGTGGCCGAGAGCAAGCGACAGGATCTGGATTTACC
CGCTGACGTAGGCATCGAGCAGCAAAAGAGACCTGCTGCAGGCGATAAGA
AACCCTGGCGACGAGTGCAGTACGGATACGATGGAGTGCCGACTGCTGCC
TGGGCTGCTCCATCTCCACCAGCTGCCATACTGTCCATCCTGAATCCTCT
GCTTGCACCGGGATTGCTTCTTTTGGGTGTGAATTTGGGAGCCCTGCTGT
ACATGCTGCTGGGACTCCTGGGCTTGGCTCCTTATCGCAGTGGCAGCGCC
AGTCGGTTAGCCTCGCATCCGGAAACCAACTCCCAATTCTGGCCGTGCGA
TCAAAGCTTCTACCACCGAGACGACAGACACAATTTGGATGAGGGCAAGG
AAACGGCTGTATATTTTGCAAGCTTTCTAGACCAT

BO24507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG34456-RA 504 CG34456-PA 1..501 17..517 2505 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34456-RA 627 CG34456-RA 59..559 17..517 2505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9362166..9362666 17..517 2505 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:45:29 has no hits.

BO24507.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:01 Download gff for BO24507.complete
Subject Subject Range Query Range Percent Splice Strand
CG34456-RA 59..559 17..519 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:40 Download gff for BO24507.complete
Subject Subject Range Query Range Percent Splice Strand
CG34456-RA 59..559 17..519 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:23 Download gff for BO24507.complete
Subject Subject Range Query Range Percent Splice Strand
CG34456-RA 59..559 17..519 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:23 Download gff for BO24507.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9362166..9362666 17..519 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:40 Download gff for BO24507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9355266..9355766 17..519 99   Plus

BO24507.pep Sequence

Translation from 16 to 535

> BO24507.pep
MWLSLIFIACLAGASSGDEKIPVEQGFVPRYTPVAESKRQDLDLPADVGI
EQQKRPAAGDKKPWRRVQYGYDGVPTAAWAAPSPPAAILSILNPLLAPGL
LLLGVNLGALLYMLLGLLGLAPYRSGSASRLASHPETNSQFWPCDQSFYH
RDDRHNLDEGKETAVYFASFLDH

BO24507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG34456-PA 167 CG34456-PA 1..167 1..167 885 100 Plus