BO24509.complete Sequence
517 bp assembled on 2010-07-02
> BO24509.complete
GAAGTTATCAGTCGACATGGGAGCATCGACAGTTAAGCCCTTTTCTGAAG
CGGAATGCAAGGCTATCAAGAAGTTCACGAAGAGTTACAAGAAGCATCAT
GCCGACCTAGACGAAGACGAGGTAAAAAGGTCAGCAGAAAATGCCTGGGG
AAAGCTTTTGCCCCATCAAAAGAAGTATTTTGAGGTGAGACCTAAAGAAA
CCCCCGTAAAAAGAATGTTGCCGGCCGCCAGGAAAAAACCTAAGAACCAG
AAGAAGAAAGCAGTCCCCAAATGGCGTTATCGTTCGAGGAAAAGACCCAT
GGCCAAGCCCACGCCAAATCCCAATAATCCTGCAATGAGCACCGCGTTCA
TTGGATTTTTGCGCGAGTACCAAAGGAGGAACACCATCGTAGACGTAAAG
AAAAGGCTGCAAAGAGCAGCCAAGATGTGGTCAAAACTATCTAAAGCTCA
GAAAAACAAATTTCGCACGGCGGGAGGGAGGGAGAGCTTTCTCAAGAATG
CAAGCTTTCTAGACCAT
BO24509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42355-RD | 486 | CG42355-PD | 1..483 | 17..499 | 2415 | 100 | Plus |
CG42355-RC | 486 | CG42355-PC | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42355-RD | 670 | CG42355-RD | 107..594 | 12..499 | 2425 | 99.8 | Plus |
CG42355-RC | 742 | CG42355-RC | 179..666 | 12..499 | 2425 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2037528..2037818 | 473..183 | 1455 | 100 | Minus |
3L | 28110227 | 3L | 2037872..2038046 | 186..12 | 860 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:21:44 has no hits.
BO24509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:58 Download gff for
BO24509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RB | 143..625 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:30 Download gff for
BO24509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RC | 184..666 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:35 Download gff for
BO24509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RC | 184..666 | 17..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:35 Download gff for
BO24509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2037874..2038041 | 17..184 | 100 | | Minus |
3L | 2037445..2037473 | 473..501 | 93 | <- | Minus |
3L | 2037529..2037816 | 185..472 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:30 Download gff for
BO24509.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2037445..2037473 | 473..501 | 93 | <- | Minus |
arm_3L | 2037529..2037816 | 185..472 | 100 | <- | Minus |
arm_3L | 2037874..2038041 | 17..184 | 100 | | Minus |
BO24509.pep Sequence
Translation from 16 to 517
> BO24509.pep
MGASTVKPFSEAECKAIKKFTKSYKKHHADLDEDEVKRSAENAWGKLLPH
QKKYFEVRPKETPVKRMLPAARKKPKNQKKKAVPKWRYRSRKRPMAKPTP
NPNNPAMSTAFIGFLREYQRRNTIVDVKKRLQRAAKMWSKLSKAQKNKFR
TAGGRESFLKNASFLDH
BO24509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:34:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42355-PD | 161 | CG42355-PD | 1..161 | 1..161 | 849 | 100 | Plus |
CG42355-PC | 161 | CG42355-PC | 1..161 | 1..161 | 849 | 100 | Plus |