BO24519.complete Sequence
415 bp assembled on 2010-05-18
GenBank Submission: KX799468
> BO24519.complete
GAAGTTATCAGTCGACATGAGTTGTGCTGCACCGCGATGCCGACCGCAGT
TTGGATCCTGTGGGTCTGGTTGTAAGCCCTGCGGCGGAGGTGGCTGCTGT
GGATCCTGCTGTGTTGGTGGTTCCTGTTGCAGGGGCGGTACAGGAGGATG
CTGCGGCGGATCCTGCGGCGGATCATGTGGCGGTTCATGTGGTGGATCCA
GTGGCGGATGCTGTGGCCCACCGCCCTGTGCCGTGGTCTCGTACCGCTTG
ACCTACGGCCCCGTGGGTCCCCTGCTGCCCTGCATGAAATGCACCTGCAA
CTGCGGATGTTGCAGCGGCGGTTGTGCGCCACCTTTCTATTTTGTGCCGA
ACAAATGCAAAAATTGCTGGGAATGGGGCTGCTTTGGCCCGCTGTACGCA
AGCTTTCTAGACCAT
BO24519.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:45:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34167-RA | 384 | CG34167-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34167-RA | 661 | CG34167-RA | 198..578 | 17..397 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16003064..16003444 | 397..17 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:45:35 has no hits.
BO24519.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:02 Download gff for
BO24519.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34167-RA | 198..578 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:42 Download gff for
BO24519.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34167-RA | 198..578 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:25 Download gff for
BO24519.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34167-RA | 198..578 | 17..399 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:25 Download gff for
BO24519.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16003062..16003444 | 17..399 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:42 Download gff for
BO24519.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16003062..16003444 | 17..399 | 99 | | Minus |
BO24519.pep Sequence
Translation from 16 to 415
> BO24519.pep
MSCAAPRCRPQFGSCGSGCKPCGGGGCCGSCCVGGSCCRGGTGGCCGGSC
GGSCGGSCGGSSGGCCGPPPCAVVSYRLTYGPVGPLLPCMKCTCNCGCCS
GGCAPPFYFVPNKCKNCWEWGCFGPLYASFLDH
BO24519.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:55:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34167-PA | 127 | CG34167-PA | 1..127 | 1..127 | 811 | 100 | Plus |
Pif2-PA | 118 | CG31483-PA | 6..79 | 15..105 | 152 | 36.6 | Plus |
CG31820-PB | 62 | CG31820-PB | 2..62 | 66..127 | 150 | 48.4 | Plus |
CG31820-PA | 62 | CG31820-PA | 2..62 | 66..127 | 150 | 48.4 | Plus |
Pif2-PA | 118 | CG31483-PA | 8..107 | 2..106 | 149 | 35.5 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 14..61 | 16..68 | 147 | 59.3 | Plus |