Clone BO24519 Report

Search the DGRC for BO24519

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG34167-RA
Protein status:BO24519.pep: Imported from assembly
Sequenced Size:415

Clone Sequence Records

BO24519.complete Sequence

415 bp assembled on 2010-05-18

GenBank Submission: KX799468

> BO24519.complete
GAAGTTATCAGTCGACATGAGTTGTGCTGCACCGCGATGCCGACCGCAGT
TTGGATCCTGTGGGTCTGGTTGTAAGCCCTGCGGCGGAGGTGGCTGCTGT
GGATCCTGCTGTGTTGGTGGTTCCTGTTGCAGGGGCGGTACAGGAGGATG
CTGCGGCGGATCCTGCGGCGGATCATGTGGCGGTTCATGTGGTGGATCCA
GTGGCGGATGCTGTGGCCCACCGCCCTGTGCCGTGGTCTCGTACCGCTTG
ACCTACGGCCCCGTGGGTCCCCTGCTGCCCTGCATGAAATGCACCTGCAA
CTGCGGATGTTGCAGCGGCGGTTGTGCGCCACCTTTCTATTTTGTGCCGA
ACAAATGCAAAAATTGCTGGGAATGGGGCTGCTTTGGCCCGCTGTACGCA
AGCTTTCTAGACCAT

BO24519.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:45:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG34167-RA 384 CG34167-PA 1..381 17..397 1905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG34167-RA 661 CG34167-RA 198..578 17..397 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16003064..16003444 397..17 1905 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:45:35 has no hits.

BO24519.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:02 Download gff for BO24519.complete
Subject Subject Range Query Range Percent Splice Strand
CG34167-RA 198..578 17..399 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:42 Download gff for BO24519.complete
Subject Subject Range Query Range Percent Splice Strand
CG34167-RA 198..578 17..399 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:25 Download gff for BO24519.complete
Subject Subject Range Query Range Percent Splice Strand
CG34167-RA 198..578 17..399 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:25 Download gff for BO24519.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16003062..16003444 17..399 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:42 Download gff for BO24519.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16003062..16003444 17..399 99   Minus

BO24519.pep Sequence

Translation from 16 to 415

> BO24519.pep
MSCAAPRCRPQFGSCGSGCKPCGGGGCCGSCCVGGSCCRGGTGGCCGGSC
GGSCGGSCGGSSGGCCGPPPCAVVSYRLTYGPVGPLLPCMKCTCNCGCCS
GGCAPPFYFVPNKCKNCWEWGCFGPLYASFLDH

BO24519.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34167-PA 127 CG34167-PA 1..127 1..127 811 100 Plus
Pif2-PA 118 CG31483-PA 6..79 15..105 152 36.6 Plus
CG31820-PB 62 CG31820-PB 2..62 66..127 150 48.4 Plus
CG31820-PA 62 CG31820-PA 2..62 66..127 150 48.4 Plus
Pif2-PA 118 CG31483-PA 8..107 2..106 149 35.5 Plus
Mst84Da-PA 63 CG17946-PA 14..61 16..68 147 59.3 Plus