BO24534.complete Sequence
421 bp assembled on 2010-05-18
GenBank Submission: KX799194
> BO24534.complete
GAAGTTATCAGTCGACATGATCTACTCGGACAATTGCTGTTGCTGCGTGG
ATCTGAAGTGCGGAAGCATCCTGATAGCCATCGTTGAGGTGCTAATACGT
GGACTAGATCGCTTCTTTGTTGATCGTGACAGCCTGCTGGGACTTTTTTC
CCTTGTGGTGAGCGGTATCTACGTTATCTGCTGCATTTTTCTACTGCTGG
GAGCAGTTCTGGGCCTGAGATATTTTCTGTTGCCTTACCTCTCAGTTTCC
TGCCTGCGGTTCTTCATTTTAGTTGCCGAGGGCGTGTTTGTAGCCACAGA
GGGCATCATGAATGAATATCTAGTTTTCGATATTCTTCAATCCCTTCTAG
GCTTGTACTTTTGGCTGGTGGTCTACTCCTATTATGATCGCTTAAAGGAC
GCGGCAAGCTTTCTAGACCAT
BO24534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34230-RA | 390 | CG34230-PA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34230-RA | 546 | CG34230-RA | 48..434 | 17..403 | 1935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11861655..11861788 | 211..344 | 670 | 100 | Plus |
| 2R | 25286936 | 2R | 11861357..11861469 | 17..129 | 565 | 100 | Plus |
| 2R | 25286936 | 2R | 11861516..11861602 | 126..212 | 435 | 100 | Plus |
| 2R | 25286936 | 2R | 11861845..11861903 | 345..403 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:45:51 has no hits.
BO24534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:06 Download gff for
BO24534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34230-RA | 48..434 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:49 Download gff for
BO24534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34230-RA | 48..434 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:30 Download gff for
BO24534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34230-RA | 48..434 | 17..405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:30 Download gff for
BO24534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11861357..11861465 | 17..125 | 100 | -> | Plus |
| 2R | 11861516..11861601 | 126..211 | 100 | -> | Plus |
| 2R | 11861656..11861788 | 212..344 | 100 | -> | Plus |
| 2R | 11861845..11861903 | 345..405 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:49 Download gff for
BO24534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7748862..7748970 | 17..125 | 100 | -> | Plus |
| arm_2R | 7749021..7749106 | 126..211 | 100 | -> | Plus |
| arm_2R | 7749161..7749293 | 212..344 | 100 | -> | Plus |
| arm_2R | 7749350..7749408 | 345..405 | 96 | | Plus |
BO24534.pep Sequence
Translation from 16 to 421
> BO24534.pep
MIYSDNCCCCVDLKCGSILIAIVEVLIRGLDRFFVDRDSLLGLFSLVVSG
IYVICCIFLLLGAVLGLRYFLLPYLSVSCLRFFILVAEGVFVATEGIMNE
YLVFDILQSLLGLYFWLVVYSYYDRLKDAASFLDH
BO24534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34230-PA | 129 | CG34230-PA | 1..129 | 1..129 | 667 | 100 | Plus |
| CG43183-PA | 138 | CG43183-PA | 1..132 | 1..126 | 148 | 27.4 | Plus |
