BO24539.complete Sequence
463 bp assembled on 2010-05-18
GenBank Submission: KX794147
> BO24539.complete
GAAGTTATCAGTCGACATGACTACAGAAAAAGGGGAGCAGTTGAGACAAC
AACTTATAGCGGCGGTGGTAAAGAAACGAGCGGCGATTGCGAGAGCCCAT
GAAATCGTGGTGCGGCTTTTGGAGCCCGGAATACCGGAGCCCGAGTTCCT
GTCCCTGCTCTGTGAGATTGGCCCCCCAAATTATTCAGACATAGTGGATG
AGCGGGAAATAAACAAACTTTGTGGATATCCACTTTGTTCGACAGTTCTA
GAAAACGTTCCCAAGCAAAAGTACAGTATCTCCGCTTCCAAAAACAAAGT
ATACGACATCACAGAACGCAAGAAATTCTGTTCCGGATACTGTTTTAAGG
CCTCCGAATATATTAAGTCACAGGTGCCCACATCGCCATTGTGGCTGCGA
GATAGGGAGACGAGACCTAGCTTTCAGCTGCTACCACGAAATACTGCAAG
CTTTCTAGACCAT
BO24539.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34183-RA | 432 | CG34183-PA | 1..429 | 17..445 | 2100 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34183-RA | 533 | CG34183-RA | 33..461 | 17..445 | 2100 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9890133..9890322 | 445..256 | 935 | 99.5 | Minus |
2L | 23513712 | 2L | 9890542..9890655 | 157..44 | 555 | 99.1 | Minus |
2L | 23513712 | 2L | 9890386..9890484 | 255..157 | 480 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:47:03 has no hits.
BO24539.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:26 Download gff for
BO24539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34183-RA | 48..476 | 17..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:18 Download gff for
BO24539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34183-RA | 33..461 | 17..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:56 Download gff for
BO24539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34183-RA | 33..461 | 17..447 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:56 Download gff for
BO24539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9890129..9890322 | 256..447 | 98 | <- | Minus |
2L | 9890386..9890483 | 158..255 | 98 | <- | Minus |
2L | 9890542..9890653 | 46..157 | 99 | <- | Minus |
2L | 9890712..9890740 | 17..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:18 Download gff for
BO24539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9890129..9890322 | 256..447 | 98 | <- | Minus |
arm_2L | 9890386..9890483 | 158..255 | 98 | <- | Minus |
arm_2L | 9890542..9890653 | 46..157 | 99 | <- | Minus |
arm_2L | 9890712..9890740 | 17..45 | 100 | | Minus |
BO24539.pep Sequence
Translation from 16 to 463
> BO24539.pep
MTTEKGEQLRQQLIAAVVKKRAAIARAHEIVVRLLEPGIPEPEFLSLLCE
IGPPNYSDIVDEREINKLCGYPLCSTVLENVPKQKYSISASKNKVYDITE
RKKFCSGYCFKASEYIKSQVPTSPLWLRDRETRPSFQLLPRNTASFLDH
BO24539.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34183-PA | 143 | CG34183-PA | 1..143 | 1..143 | 744 | 100 | Plus |