BO24543.complete Sequence
469 bp assembled on 2010-05-18
> BO24543.complete
GAAGTTATCAGTCGACATGATGGCTGATTTGGTGAGCGGTGAAGCTTCTG
AATCCGACGAGGAGCTGCAGGAGAAGAATAAGATTTTTGCTGCTGAAATT
TCGGGCGAAGCCTCCGAAGAGGATGATGAAGACATTTACGAGCAAGGCCG
AAGCAGCAACCAGGTCAACAGCACGGCTTCCATTTACCGGAATAATCTGC
TTCAGCGGAAACTAATCGAAAACAACATTGCCATTTGGAGATCCCTTACC
GCTTTCACTCGCAGCTTTGTGTTGAGTGCATCAAAGCAGCTCGTAACCAC
TGATCAAATGCTCATCAAGTCGCAACATAGTCTTCAGTCGGCTCACACAT
CCCTGCAGCAGGCCCAGAAGAACGCCCAGGACCTGCAAAACAGGGTGGCT
GATGTTATTACCAGCAACTTCCTCCCGCACATAAGCATCCAGAAGGCAAC
CGCAAGCTTTCTAGACCAT
BO24543.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Blos3-RA | 435 | CG34255-PA | 1..432 | 20..451 | 2160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Blos3-RA | 564 | CG34255-RA | 82..516 | 17..451 | 2175 | 100 | Plus |
Rad9-RA | 1779 | CG3945-RA | 1337..1471 | 384..250 | 675 | 100 | Minus |
Rad9-RA | 1779 | CG3945-RA | 1471..1519 | 65..17 | 245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18870614..18870849 | 216..451 | 1180 | 100 | Plus |
3L | 28110227 | 3L | 18870426..18870560 | 81..215 | 675 | 100 | Plus |
3L | 28110227 | 3L | 18870305..18870377 | 17..89 | 335 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:47:14 has no hits.
BO24543.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:28 Download gff for
BO24543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34255-RA | 52..486 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:21 Download gff for
BO24543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
blos3-RA | 82..516 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:59 Download gff for
BO24543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Blos3-RA | 82..516 | 17..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:59 Download gff for
BO24543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18870305..18870370 | 17..82 | 100 | -> | Plus |
3L | 18870428..18870560 | 83..215 | 100 | -> | Plus |
3L | 18870614..18870849 | 216..453 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:21 Download gff for
BO24543.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18863714..18863949 | 216..453 | 99 | | Plus |
arm_3L | 18863405..18863470 | 17..82 | 100 | -> | Plus |
arm_3L | 18863528..18863660 | 83..215 | 100 | -> | Plus |
BO24543.pep Sequence
Translation from 16 to 469
> BO24543.pep
MMADLVSGEASESDEELQEKNKIFAAEISGEASEEDDEDIYEQGRSSNQV
NSTASIYRNNLLQRKLIENNIAIWRSLTAFTRSFVLSASKQLVTTDQMLI
KSQHSLQSAHTSLQQAQKNAQDLQNRVADVITSNFLPHISIQKATASFLD
H
BO24543.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Blos3-PA | 144 | CG34255-PA | 1..144 | 2..145 | 703 | 100 | Plus |