Clone BO24545 Report

Search the DGRC for BO24545

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG34316-RA
Protein status:BO24545.pep: Imported from assembly
Sequenced Size:835

Clone Sequence Records

BO24545.complete Sequence

835 bp assembled on 2010-05-25

GenBank Submission: KX798698

> BO24545.complete
GAAGTTATCAGTCGACATGCAGCGGGCAAAACTCACTTCACAGGTCCTGC
TGGCCACAGCCATTCTCTACGCATGCCTGTCGCCCGCTGCCTGCGTTTAC
GAGGCGAAAATCTTGGCGTTCCTTCAGGAGTTCCGTATGCGCATGTGCCA
CCCAATCCCGAATCTAGGCCTGCCCGCATTGGACCCACTGCAGTTGGGGC
CTGCTGAAACAGAACTGAACAACAAATACCTCGTGGACTTCACTGGGTCC
ATTGACAACTTTCAGTTGCACGGATTGTCCGATTTTGATGTGCCTGCGCT
CAGCTTATCCCCGGTGCCCGGTTTGAAGAACACCATTAACGTTACCTTGC
CACTCACGTACTTCAAATCCTTATACACCGCCAAAGGATCCTTGGCCTAT
ATCCTCAACTTGGCCGGTGATGGCAATGCCGAAACCTCCATTACAAACTT
TTCAATCCTCATTTCGTTTCGATTGAGATCGGTGTCTCCCCTGGCCATAT
CTTCATTACAGATTGAGCTGCGTTTGGGAGGACTATGGATTAACTTTGAT
AACTTGATGGAAGAGGATCGCATCAATGATTTCATCCATGCTTTGGTGAA
CGAAATGGGAGTGGAGCTGCTTGGCGACGTCTGGGATTATGAACAGGGCA
CAGTGGTCTCCAAAGTCCAAGCGGCCGTTAACAACTTTTTGGGTCAGTAC
TCTCTGTCGGATATAATTCAAATAATAATTGGTGGCGACGGAGAAGGAGA
GAGTGCGCCCATATTTGATGGGGTGGAACCGGATTGCAAGCCGGATGCTA
CCACGACCCCGCAAGACGCAAGCTTTCTAGACCAT

BO24545.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG34316-RA 804 CG34316-PA 1..801 17..817 4005 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG34316-RA 907 CG34316-RA 34..834 17..817 4005 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:37:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15231158..15231399 433..674 1210 100 Plus
3R 32079331 3R 15230618..15230838 17..237 1105 100 Plus
3R 32079331 3R 15230897..15231091 238..432 975 100 Plus
3R 32079331 3R 15231469..15231613 673..817 725 100 Plus
Blast to na_te.dros performed 2014-11-27 01:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dhyd\Minos 1773 Dhyd\Minos DHMINOS 1773bp Derived from Z29098. 1208..1265 475..418 110 65.5 Minus

BO24545.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-25 15:30:25 Download gff for BO24545.complete
Subject Subject Range Query Range Percent Splice Strand
CG34316-RB 815..1615 17..819 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:23 Download gff for BO24545.complete
Subject Subject Range Query Range Percent Splice Strand
CG34316-RA 34..834 17..819 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:08 Download gff for BO24545.complete
Subject Subject Range Query Range Percent Splice Strand
CG34316-RA 34..834 17..819 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:08 Download gff for BO24545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15230618..15230838 17..237 100 -> Plus
3R 15230897..15231091 238..432 100 -> Plus
3R 15231158..15231398 433..673 100 -> Plus
3R 15231470..15231613 674..819 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:23 Download gff for BO24545.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11056340..11056560 17..237 100 -> Plus
arm_3R 11056619..11056813 238..432 100 -> Plus
arm_3R 11056880..11057120 433..673 100 -> Plus
arm_3R 11057192..11057335 674..819 98   Plus

BO24545.pep Sequence

Translation from 16 to 835

> BO24545.pep
MQRAKLTSQVLLATAILYACLSPAACVYEAKILAFLQEFRMRMCHPIPNL
GLPALDPLQLGPAETELNNKYLVDFTGSIDNFQLHGLSDFDVPALSLSPV
PGLKNTINVTLPLTYFKSLYTAKGSLAYILNLAGDGNAETSITNFSILIS
FRLRSVSPLAISSLQIELRLGGLWINFDNLMEEDRINDFIHALVNEMGVE
LLGDVWDYEQGTVVSKVQAAVNNFLGQYSLSDIIQIIIGGDGEGESAPIF
DGVEPDCKPDATTTPQDASFLDH

BO24545.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34316-PA 267 CG34316-PA 1..267 1..267 1368 100 Plus
CG8997-PB 260 CG8997-PB 32..247 32..244 162 26.4 Plus
CG8997-PA 260 CG8997-PA 32..247 32..244 162 26.4 Plus
CG10407-PB 259 CG10407-PB 57..257 37..234 156 23.5 Plus
CG10407-PA 259 CG10407-PA 57..257 37..234 156 23.5 Plus