BO24545.complete Sequence
835 bp assembled on 2010-05-25
GenBank Submission: KX798698
> BO24545.complete
GAAGTTATCAGTCGACATGCAGCGGGCAAAACTCACTTCACAGGTCCTGC
TGGCCACAGCCATTCTCTACGCATGCCTGTCGCCCGCTGCCTGCGTTTAC
GAGGCGAAAATCTTGGCGTTCCTTCAGGAGTTCCGTATGCGCATGTGCCA
CCCAATCCCGAATCTAGGCCTGCCCGCATTGGACCCACTGCAGTTGGGGC
CTGCTGAAACAGAACTGAACAACAAATACCTCGTGGACTTCACTGGGTCC
ATTGACAACTTTCAGTTGCACGGATTGTCCGATTTTGATGTGCCTGCGCT
CAGCTTATCCCCGGTGCCCGGTTTGAAGAACACCATTAACGTTACCTTGC
CACTCACGTACTTCAAATCCTTATACACCGCCAAAGGATCCTTGGCCTAT
ATCCTCAACTTGGCCGGTGATGGCAATGCCGAAACCTCCATTACAAACTT
TTCAATCCTCATTTCGTTTCGATTGAGATCGGTGTCTCCCCTGGCCATAT
CTTCATTACAGATTGAGCTGCGTTTGGGAGGACTATGGATTAACTTTGAT
AACTTGATGGAAGAGGATCGCATCAATGATTTCATCCATGCTTTGGTGAA
CGAAATGGGAGTGGAGCTGCTTGGCGACGTCTGGGATTATGAACAGGGCA
CAGTGGTCTCCAAAGTCCAAGCGGCCGTTAACAACTTTTTGGGTCAGTAC
TCTCTGTCGGATATAATTCAAATAATAATTGGTGGCGACGGAGAAGGAGA
GAGTGCGCCCATATTTGATGGGGTGGAACCGGATTGCAAGCCGGATGCTA
CCACGACCCCGCAAGACGCAAGCTTTCTAGACCAT
BO24545.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:37:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34316-RA | 804 | CG34316-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:37:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34316-RA | 907 | CG34316-RA | 34..834 | 17..817 | 4005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:37:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15231158..15231399 | 433..674 | 1210 | 100 | Plus |
3R | 32079331 | 3R | 15230618..15230838 | 17..237 | 1105 | 100 | Plus |
3R | 32079331 | 3R | 15230897..15231091 | 238..432 | 975 | 100 | Plus |
3R | 32079331 | 3R | 15231469..15231613 | 673..817 | 725 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 01:37:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dhyd\Minos | 1773 | Dhyd\Minos DHMINOS 1773bp Derived from Z29098. | 1208..1265 | 475..418 | 110 | 65.5 | Minus |
BO24545.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-25 15:30:25 Download gff for
BO24545.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34316-RB | 815..1615 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:23 Download gff for
BO24545.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34316-RA | 34..834 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:08 Download gff for
BO24545.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34316-RA | 34..834 | 17..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:08 Download gff for
BO24545.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15230618..15230838 | 17..237 | 100 | -> | Plus |
3R | 15230897..15231091 | 238..432 | 100 | -> | Plus |
3R | 15231158..15231398 | 433..673 | 100 | -> | Plus |
3R | 15231470..15231613 | 674..819 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:23 Download gff for
BO24545.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11056340..11056560 | 17..237 | 100 | -> | Plus |
arm_3R | 11056619..11056813 | 238..432 | 100 | -> | Plus |
arm_3R | 11056880..11057120 | 433..673 | 100 | -> | Plus |
arm_3R | 11057192..11057335 | 674..819 | 98 | | Plus |
BO24545.pep Sequence
Translation from 16 to 835
> BO24545.pep
MQRAKLTSQVLLATAILYACLSPAACVYEAKILAFLQEFRMRMCHPIPNL
GLPALDPLQLGPAETELNNKYLVDFTGSIDNFQLHGLSDFDVPALSLSPV
PGLKNTINVTLPLTYFKSLYTAKGSLAYILNLAGDGNAETSITNFSILIS
FRLRSVSPLAISSLQIELRLGGLWINFDNLMEEDRINDFIHALVNEMGVE
LLGDVWDYEQGTVVSKVQAAVNNFLGQYSLSDIIQIIIGGDGEGESAPIF
DGVEPDCKPDATTTPQDASFLDH
BO24545.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34316-PA | 267 | CG34316-PA | 1..267 | 1..267 | 1368 | 100 | Plus |
CG8997-PB | 260 | CG8997-PB | 32..247 | 32..244 | 162 | 26.4 | Plus |
CG8997-PA | 260 | CG8997-PA | 32..247 | 32..244 | 162 | 26.4 | Plus |
CG10407-PB | 259 | CG10407-PB | 57..257 | 37..234 | 156 | 23.5 | Plus |
CG10407-PA | 259 | CG10407-PA | 57..257 | 37..234 | 156 | 23.5 | Plus |