Clone BO24546 Report

Search the DGRC for BO24546

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG34149-RA
Protein status:BO24546.pep: Imported from assembly
Sequenced Size:949

Clone Sequence Records

BO24546.complete Sequence

949 bp assembled on 2010-05-25

GenBank Submission: KX799271

> BO24546.complete
GAAGTTATCAGTCGACATGAGCTTCTCGGAAAACACCTCCGATTCTGAAT
GGAAGACAGACAAAATGCTAAAGGCGCGGACTGCTAAGAAATCTTTAAAG
CTGGACAAGGAGCACAGAACTCTGAAACCTAAATATAACCAGAAGTTCTG
CGAAAAGTGGCTCAAGATTTTCGATCCATGGCTCCGACGGGCGGCCGAGG
ATCCTAACAAGCCATTCTGCCGCGCTTGCCAGTGCACCATGGACTGCAAT
CGATGCCACCTGGTGCGGCACGAGCGAACCACCAAGCACAAGCGCAATCT
GGAGGCTCTGCTCACAAAGGGCGAAGGCGCGGCGGTCCAGGAGTTCCGGA
TTCGCCAGCAGCGTAGCAAGTACTATCACCAGCGTAAATTGGTAGTGATG
GAGCCCTTGGCTGAGAACCACGAGTTGGAGCCGCCTTCCACTCCAGAGCC
TATGCCCGTGATGGCCATTGCTGATCAAAGCCTCTGTTCTGCAGCCAGTG
AGAAGGTGACAGTACCCAAACAGGAGTTCTTATCAGAGACAGAGGTCACA
ACAAAGATGACCGAACCCCCGTCAAGCCATGCCAATTGCAGTGACAGCTC
CTCTTCTGCCTCTAAGCAGGAGGGCATAAAGTTACTAATGCAGATCCACC
AGGACAAAAACGAACTCATGGAATCCTTCCGCGAGCTGATGGGAAGCCAG
AGGACCCTAAGTCACACACCGCCGCCCAAGGAGAAGAATCATGTGGATCT
GTTTTTCGAAAGCGTCAGTTCCAGCGTGAAAGCCCTCTCGCCAAAGTTGG
TAGCGGAAGCCAAGATGCGAGTATCGCAGCTGATCTGTGAGCTCGAGCTT
CGCGGCCTCAGTGAAACCAGCCAAACGGACGCACTGAATCCAAACCCTCA
AGCTAATGAATCGCTCGCACTGCGCCCATCAGCAAGCTTTCTAGACCAT

BO24546.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG34149-RB 918 CG34149-PB 1..915 17..931 4575 100 Plus
CG34149-RA 918 CG34149-PA 1..915 17..931 4575 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG34149-RB 1032 CG34149-RB 40..954 17..931 4575 100 Plus
CG34149-RA 1072 CG34149-RA 40..954 17..931 4575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22380255..22381135 51..931 4405 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:36:54 has no hits.

BO24546.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-25 15:35:33 Download gff for BO24546.complete
Subject Subject Range Query Range Percent Splice Strand
CG34149-RB 40..954 17..933 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:07 Download gff for BO24546.complete
Subject Subject Range Query Range Percent Splice Strand
CG34149-RA 40..954 17..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:54 Download gff for BO24546.complete
Subject Subject Range Query Range Percent Splice Strand
CG34149-RA 40..954 17..933 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:54 Download gff for BO24546.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22380167..22380201 17..51 100 -> Plus
3R 22380256..22381135 52..933 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:07 Download gff for BO24546.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18205889..18205923 17..51 100 -> Plus
arm_3R 18205978..18206857 52..933 99   Plus

BO24546.pep Sequence

Translation from 16 to 949

> BO24546.pep
MSFSENTSDSEWKTDKMLKARTAKKSLKLDKEHRTLKPKYNQKFCEKWLK
IFDPWLRRAAEDPNKPFCRACQCTMDCNRCHLVRHERTTKHKRNLEALLT
KGEGAAVQEFRIRQQRSKYYHQRKLVVMEPLAENHELEPPSTPEPMPVMA
IADQSLCSAASEKVTVPKQEFLSETEVTTKMTEPPSSHANCSDSSSSASK
QEGIKLLMQIHQDKNELMESFRELMGSQRTLSHTPPPKEKNHVDLFFESV
SSSVKALSPKLVAEAKMRVSQLICELELRGLSETSQTDALNPNPQANESL
ALRPSASFLDH

BO24546.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG34149-PB 305 CG34149-PB 1..305 1..305 1590 100 Plus
CG34149-PA 305 CG34149-PA 1..305 1..305 1590 100 Plus
CG43342-PA 180 CG31169-PA 56..151 196..283 154 42.3 Plus