Clone BO24551 Report

Search the DGRC for BO24551

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG34273-RA
Protein status:BO24551.pep: Imported from assembly
Sequenced Size:418

Clone Sequence Records

BO24551.complete Sequence

418 bp assembled on 2010-05-18

GenBank Submission: KX797521

> BO24551.complete
GAAGTTATCAGTCGACATGAAGTTGTCCCTTGTTCTCTTCGTCCTCTCGA
TGGTTTTGTATGTGGCCCATGTCAGAGCTGCTGACAGCAGCACAAGCACG
GAATCGAGTACCAGCACCACGGATAGCACCACCACGGAATCCACCACAGA
GTCTACCACATCGTCGTCCTCTTCATCTAGTTCGGGCTCAAACAAGAAAA
TCGTGCGTCTCAGCAATCTGAAGTACTCGATCACCAGGAAAATCAGAGTT
GGATCCACCACCAGTTCCTCGACCAGATCCAAAAGTTCCCGCGCCAAGTC
CCGCAAGGCCCGTCTAAATGCGGCTAAACGATCCAAGAAGGCCGCCAACC
GAAAACTCAACAAGAAGTCCAAGAACCGCAATGTACGCGTGGTCCGCGGT
GCAAGCTTTCTAGACCAT

BO24551.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG34273-RA 387 CG34273-PA 1..384 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34273-RA 446 CG34273-RA 10..395 15..400 1930 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14517051..14517436 15..400 1930 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:45:57 has no hits.

BO24551.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:07 Download gff for BO24551.complete
Subject Subject Range Query Range Percent Splice Strand
CG34273-RA 12..395 17..402 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:51 Download gff for BO24551.complete
Subject Subject Range Query Range Percent Splice Strand
CG34273-RA 12..395 17..402 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:32 Download gff for BO24551.complete
Subject Subject Range Query Range Percent Splice Strand
CG34273-RA 12..395 17..402 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:32 Download gff for BO24551.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14517053..14517436 17..402 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:51 Download gff for BO24551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10342775..10343158 17..402 99   Plus

BO24551.pep Sequence

Translation from 16 to 418

> BO24551.pep
MKLSLVLFVLSMVLYVAHVRAADSSTSTESSTSTTDSTTTESTTESTTSS
SSSSSSGSNKKIVRLSNLKYSITRKIRVGSTTSSSTRSKSSRAKSRKARL
NAAKRSKKAANRKLNKKSKNRNVRVVRGASFLDH

BO24551.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG34273-PA 128 CG34273-PA 1..128 1..128 597 100 Plus
CG14237-PB 121 CG14237-PB 5..120 2..119 186 39.5 Plus
CG14851-PA 152 CG14851-PA 49..152 22..128 174 36.4 Plus
CG42568-PB 110 CG42568-PB 23..105 40..124 165 49.4 Plus
CG42568-PA 110 CG42568-PA 23..105 40..124 165 49.4 Plus