BO24552.complete Sequence
619 bp assembled on 2010-05-18
GenBank Submission: KX798857
> BO24552.complete
GAAGTTATCAGTCGACATGAAATACTTCGAATTCCTAAGCCTTTCGTCGG
TGGGCCTCTGCATAGCCTGTGGGGACTTGCTATTAGCAGTGAGCATACTG
GGTCCTTCGAGCTTTTACCTATACCTCGATTTCATGGATATTGAAAAATG
GGAACAGGATGCCGAAGTGGAAGCTTTGACTCCCATTGGAACCTTCTTTT
CAACATTGGTGAACTATCTGTGGGTGCGAGAGTTCTCGCAGGTTTTCTAT
ATGACAGCAACGTTTATAATTTGGGTGAAGGCAATGATAAACCTAATGGT
GGCCTGTATTCTTATCGACGGCATAAAGCAGAAACGTCTCGTATGTATTG
CTCCCTGGTTGATAAACTCATGCCTATCAATGGTTGTTGAAACGGGCATT
TTTGTGAGCCTGGAGCTGCGAATTGATGAAGTTGATGCCGCAGTGGATCG
TCGAATAGCGAGAAGCCTAATCTTTGGCGTATTTATAGTGCTGAACGCGT
TATTTTCGTATGGTATCTTTGCTCTTTATCGCAAGCTAAAGTCTGACCCC
AGTGAGAATGTTGAAGTCATTCCCCAAAGCCCGCCACACACATTTAATGC
CGCAAGCTTTCTAGACCAT
BO24552.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34138-RA | 588 | CG34138-PA | 1..585 | 17..601 | 2910 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34138-RA | 748 | CG34138-RA | 72..656 | 17..601 | 2910 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19635020..19635212 | 17..209 | 950 | 99.5 | Plus |
| 3R | 32079331 | 3R | 19635456..19635614 | 330..488 | 795 | 100 | Plus |
| 3R | 32079331 | 3R | 19635267..19635389 | 209..331 | 615 | 100 | Plus |
| 3R | 32079331 | 3R | 19635673..19635787 | 487..601 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:02 has no hits.
BO24552.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:08 Download gff for
BO24552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34138-RA | 1324..1908 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:54 Download gff for
BO24552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34138-RA | 72..656 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:34 Download gff for
BO24552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34138-RA | 72..656 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:34 Download gff for
BO24552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19635020..19635212 | 17..209 | 99 | -> | Plus |
| 3R | 19635268..19635389 | 210..331 | 100 | -> | Plus |
| 3R | 19635458..19635614 | 332..488 | 100 | -> | Plus |
| 3R | 19635675..19635787 | 489..603 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:54 Download gff for
BO24552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15460742..15460934 | 17..209 | 99 | -> | Plus |
| arm_3R | 15460990..15461111 | 210..331 | 100 | -> | Plus |
| arm_3R | 15461180..15461336 | 332..488 | 100 | -> | Plus |
| arm_3R | 15461397..15461509 | 489..603 | 98 | | Plus |
BO24552.pep Sequence
Translation from 16 to 619
> BO24552.pep
MKYFEFLSLSSVGLCIACGDLLLAVSILGPSSFYLYLDFMDIEKWEQDAE
VEALTPIGTFFSTLVNYLWVREFSQVFYMTATFIIWVKAMINLMVACILI
DGIKQKRLVCIAPWLINSCLSMVVETGIFVSLELRIDEVDAAVDRRIARS
LIFGVFIVLNALFSYGIFALYRKLKSDPSENVEVIPQSPPHTFNAASFLD
H
BO24552.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34138-PA | 195 | CG34138-PA | 1..195 | 1..195 | 997 | 100 | Plus |
