Clone BO24553 Report

Search the DGRC for BO24553

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG34292-RA
Protein status:BO24553.pep: Imported from assembly
Sequenced Size:619

Clone Sequence Records

BO24553.complete Sequence

619 bp assembled on 2010-05-18

GenBank Submission: KX797760

> BO24553.complete
GAAGTTATCAGTCGACATGTTTCGTTCTCTATCCGTGCTGATGTTCAATA
CTTCTCAAATAGAGACAAATCTCTTTGGCATGGCCGACGATGTGTACAAT
ACCATTGAGATCTTCAAAGAGGCCGCCAGTTTCGAGGCCAAGATTGGTAG
ACCCTATAGAATGATATCGAGCCTTATAGACTGCTTGGTCTTCATGGTGG
TGGCTCTAATGGTGGTCGGTTTCATCATGTACGATCGCATTATGCTGTTT
ACAAAACTGGCTAAGATCAATCAGAGATATAACCAAGAGGTGACTGTAAA
AGCAAAAAGAATTCGAAAGCCCAAAACATCCGATTCTCTCCCAGAAGAAG
ATGATACCGAAAATGCTGTGGATCAGGCAGAAGAAGACGGTATCAGCGTG
GCACATTCCGAATATGCAACAGATGACGATGTCGCAACCCTTCAACCCAT
TGACGATGAAGATACAATTAAAGTCGCAATGTTCGGAACTCCCAATTGGG
CCTTTAAATGGCTAGCCACTATAAGAAACGAAAGTTTCGGATCAATTTAC
GATGGGTACTTCCGTAGATTGCATCTACACGTCACACATTGTAAATCGGT
TGCAAGCTTTCTAGACCAT

BO24553.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG34292-RA 588 CG34292-PA 1..585 17..601 2925 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG34292-RA 844 CG34292-RA 61..645 17..601 2925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27062276..27062860 17..601 2925 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:46:08 has no hits.

BO24553.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:09 Download gff for BO24553.complete
Subject Subject Range Query Range Percent Splice Strand
CG34292-RA 67..645 23..603 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:57 Download gff for BO24553.complete
Subject Subject Range Query Range Percent Splice Strand
CG34292-RA 67..645 23..603 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:36 Download gff for BO24553.complete
Subject Subject Range Query Range Percent Splice Strand
CG34292-RA 67..645 23..603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:36 Download gff for BO24553.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27062282..27062860 23..603 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:57 Download gff for BO24553.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22888004..22888582 23..603 99   Plus

BO24553.pep Sequence

Translation from 16 to 619

> BO24553.pep
MFRSLSVLMFNTSQIETNLFGMADDVYNTIEIFKEAASFEAKIGRPYRMI
SSLIDCLVFMVVALMVVGFIMYDRIMLFTKLAKINQRYNQEVTVKAKRIR
KPKTSDSLPEEDDTENAVDQAEEDGISVAHSEYATDDDVATLQPIDDEDT
IKVAMFGTPNWAFKWLATIRNESFGSIYDGYFRRLHLHVTHCKSVASFLD
H

BO24553.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG34292-PA 195 CG34292-PA 1..195 1..195 1003 100 Plus