BO24555.complete Sequence
451 bp assembled on 2010-05-18
GenBank Submission: KX796449
> BO24555.complete
GAAGTTATCAGTCGACATGCAGAATCCCATTTGTGAACCGTTCACCAGTT
GGCCGGTAAAGTTCGACATCAACCAGCTCATCAAGGAGTTCCAGCCCGAG
GAGAAGGGGCGCCAGGTAGATGAGGATAAGTCGCCGCGGGACTTTCTCCA
CCTACCCGACAACAACTGGGTGGTCCTGCCCAGTTTTAAGTACCAATTCG
AGCACTTGACCCCGTATCTTTCCTGCCGCCAGAGCAAATATATGCGGTGC
CGCTTTCAGAAGTTTTTAGATAATGTTCCCAGCAGCTATGTGACCATCTC
CTTGTATGGCTCCAATGTGAGCAACATGCCTAAGCCGAGGCGAAAGAGTC
TGAATGGCCAGTTCTACGGGGTGGATAACAAACTGGCTCCTGTTCCGGCG
GTCGCAGATCCTCGCTCTCCTCCGCACCGAAAGGCAAGCTTTCTAGACCA
T
BO24555.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34298-RA | 420 | CG34298-PA | 1..417 | 17..433 | 2070 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34298-RA | 548 | CG34298-RA | 48..464 | 17..433 | 2070 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29999842..30000149 | 17..324 | 1540 | 100 | Plus |
3R | 32079331 | 3R | 30000211..30000319 | 325..433 | 530 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:14 has no hits.
BO24555.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:10 Download gff for
BO24555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34298-RA | 1..417 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:00 Download gff for
BO24555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34298-RA | 48..464 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:39 Download gff for
BO24555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34298-RA | 48..464 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:39 Download gff for
BO24555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29999842..30000149 | 17..324 | 100 | -> | Plus |
3R | 30000211..30000319 | 325..435 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:00 Download gff for
BO24555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25825564..25825871 | 17..324 | 100 | -> | Plus |
arm_3R | 25825933..25826041 | 325..435 | 97 | | Plus |
BO24555.pep Sequence
Translation from 16 to 451
> BO24555.pep
MQNPICEPFTSWPVKFDINQLIKEFQPEEKGRQVDEDKSPRDFLHLPDNN
WVVLPSFKYQFEHLTPYLSCRQSKYMRCRFQKFLDNVPSSYVTISLYGSN
VSNMPKPRRKSLNGQFYGVDNKLAPVPAVADPRSPPHRKASFLDH
BO24555.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:56:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34298-PA | 139 | CG34298-PA | 1..139 | 1..139 | 763 | 100 | Plus |