BO24556.complete Sequence
604 bp assembled on 2010-05-18
GenBank Submission: KX799345
> BO24556.complete
GAAGTTATCAGTCGACATGATCAATGAGCTATCCGCTCCTAAGCTTAAGC
TTGTATTCATTAATGTATTTTCGATTTTGCACAGTACCACTTATTTGAAT
GTGTACCGCTTATATGCAGACTTAAAAAATGTTAAAGCTGGCGTGGATGG
GTCTAATGAGGAGCTTTGGATCAGGGAAATCTTTACATTCCTCATCAGTG
CTCTCATAGTGATTCGCTTTTGTCTATGCTTCGTAGGATTGGCTTCTAAC
ATTGTGGCCATATACCCAATTCTAACAAATTCGCAAGCTGAGATGCTTAT
GCCTACCATTATAGTGCAGGCCATTGACAAAGTCATTCTAAATCTATACG
AGATTATTTTGGGCTACGGCAGCTTGTGCTATCTCTATCCTGAAAGTACG
GCTGTTTTCATCTTCTTCCTTATACAGATGGGAGCCAAGATTGTCTGCAG
CATCTCTGTCTTGAATATTTATTCGGACCATCACAATCACTTGGCAACTC
TAGTTTCCTTCAACGAGGAATCACATAGCTTGGGACCAGACAGTGTAGAA
GAAATCGAATTGGGGAACCAAAACTTGGATTTTTCCGCAAGCTTTCTAGA
CCAT
BO24556.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34307-RB | 573 | CG34307-PB | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34307-RB | 718 | CG34307-RB | 76..645 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11897657..11897901 | 17..261 | 1225 | 100 | Plus |
| 3R | 32079331 | 3R | 11897961..11898162 | 262..463 | 1010 | 100 | Plus |
| 3R | 32079331 | 3R | 11898223..11898346 | 463..586 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:19 has no hits.
BO24556.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:11 Download gff for
BO24556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34307-RA | 76..521 | 17..462 | 100 | -> | Plus |
| CG34307-RA | 583..706 | 463..588 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:02 Download gff for
BO24556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34307-RB | 76..645 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:41 Download gff for
BO24556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34307-RB | 76..645 | 17..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:41 Download gff for
BO24556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11898223..11898346 | 463..588 | 98 | | Plus |
| 3R | 11897657..11897901 | 17..261 | 100 | -> | Plus |
| 3R | 11897961..11898161 | 262..462 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:02 Download gff for
BO24556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7723945..7724068 | 463..588 | 98 | | Plus |
| arm_3R | 7723379..7723623 | 17..261 | 100 | -> | Plus |
| arm_3R | 7723683..7723883 | 262..462 | 100 | -> | Plus |
BO24556.pep Sequence
Translation from 16 to 604
> BO24556.pep
MINELSAPKLKLVFINVFSILHSTTYLNVYRLYADLKNVKAGVDGSNEEL
WIREIFTFLISALIVIRFCLCFVGLASNIVAIYPILTNSQAEMLMPTIIV
QAIDKVILNLYEIILGYGSLCYLYPESTAVFIFFLIQMGAKIVCSISVLN
IYSDHHNHLATLVSFNEESHSLGPDSVEEIELGNQNLDFSASFLDH
BO24556.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34307-PB | 190 | CG34307-PB | 1..190 | 1..190 | 961 | 100 | Plus |
