BO24558.complete Sequence
589 bp assembled on 2010-05-18
GenBank Submission: KX799716
> BO24558.complete
GAAGTTATCAGTCGACATGGCTGGAATCAGTGGAAGTTCCCAGCCGCGTC
TGCAGCTATATATATTCTTGTGCCTGATGGCGTCGGTGTTTGCTTCATTA
CCGGAGGAACTGAGAGGAGCTGCAGGACCTGAATCGAGAATGGATGTTCT
AGGACTCTCGCCGGGACAAAGAGTCCTGGCTGCAGTGCCTGCGTCAGGAC
GCACGAGTTTTTTGCTGTACCAATTAGCTTTGGCCATAAATTCAGCCGCC
GGCCTGGAATCGCCAACGATGCAGGAAGTGGAGGTGGTCGATGTGGTGGA
GAACCAGGAGCAGTTCCTGCCGGCGAGCCCGGATCCCAACTGGCTGGCCG
CCATGGCGAATGAGTTTCAGAGTGTGCCAGTGTACGAGACCTTTCCGGCG
GACTTGCAGAACTGGCTGATGGATGGCTACGGGATCAGTGCCACGGATTT
CTACCACAGCTGGAGCAGAGCAGGATTTGGCAGGAGGAGCAGCTCCCGCA
CCCAGCTGATCTGTACGGCAGATGGCCAGTGCTATGAGGTCAACAAAATC
GTCACTGCCTGCTGTCCATTTGCAAGCTTTCTAGACCAT
BO24558.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34251-RB | 558 | CG34251-PB | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG34251-RA | 558 | CG34251-PA | 1..555 | 17..571 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34251-RB | 804 | CG34251-RB | 223..777 | 17..571 | 2775 | 100 | Plus |
| CG34251-RA | 1059 | CG34251-RA | 63..617 | 17..571 | 2775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17682933..17683139 | 365..571 | 1035 | 100 | Plus |
| 3L | 28110227 | 3L | 17673657..17673838 | 17..198 | 910 | 100 | Plus |
| 3L | 28110227 | 3L | 17677399..17677574 | 195..370 | 880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:24 has no hits.
BO24558.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:12 Download gff for
BO24558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34251-RA | 63..617 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:04 Download gff for
BO24558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34251-RA | 63..617 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:43 Download gff for
BO24558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34251-RA | 63..617 | 17..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:43 Download gff for
BO24558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17673657..17673837 | 17..197 | 100 | -> | Plus |
| 3L | 17677402..17677574 | 198..370 | 100 | -> | Plus |
| 3L | 17682939..17683139 | 371..573 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:04 Download gff for
BO24558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17666757..17666937 | 17..197 | 100 | -> | Plus |
| arm_3L | 17670502..17670674 | 198..370 | 100 | -> | Plus |
| arm_3L | 17676039..17676239 | 371..573 | 99 | | Plus |
BO24558.pep Sequence
Translation from 16 to 589
> BO24558.pep
MAGISGSSQPRLQLYIFLCLMASVFASLPEELRGAAGPESRMDVLGLSPG
QRVLAAVPASGRTSFLLYQLALAINSAAGLESPTMQEVEVVDVVENQEQF
LPASPDPNWLAAMANEFQSVPVYETFPADLQNWLMDGYGISATDFYHSWS
RAGFGRRSSSRTQLICTADGQCYEVNKIVTACCPFASFLDH
BO24558.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34251-PB | 185 | CG34251-PB | 1..185 | 1..185 | 959 | 100 | Plus |
| CG34251-PA | 185 | CG34251-PA | 1..185 | 1..185 | 959 | 100 | Plus |
