BO24568.complete Sequence
301 bp assembled on 2010-05-18
GenBank Submission: KX796275
> BO24568.complete
GAAGTTATCAGTCGACATGGCTTTTCTTTTTAAACTATTTACCTTCTTGG
CGGTGGCCGCCATTTTGATCCAAATGACACTTGCACTGGAGTTTATGGAT
GAAGACTTTCTGGCAAACGATGACGGTCATCACTTGGACGAAGAGTCCGC
TGAAGTGCCTGGTATTTTGACTGGTTATACCAGAGATACGATCGCTCACT
TTAATCCTCGCAAAGTAGATGGGGGATTTCGACAATTGTGGGAACGTGTT
CCCCTTCAAAAAGTCGATGATATTAAGCGGAGAGCAAGCTTTCTAGACCA
T
BO24568.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42246-RB | 270 | CG42246-PB | 1..267 | 17..283 | 1335 | 100 | Plus |
| CG42246-RA | 270 | CG42246-PA | 1..267 | 17..283 | 1335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42246-RB | 387 | CG42246-RB | 70..337 | 16..283 | 1340 | 100 | Plus |
| CG42246-RA | 578 | CG42246-RA | 70..337 | 16..283 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7411508..7411715 | 283..76 | 1040 | 100 | Minus |
| X | 23542271 | X | 7411777..7411837 | 76..16 | 305 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:47:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 3915..3979 | 121..59 | 121 | 69.2 | Minus |
BO24568.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:33 Download gff for
BO24568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42246-RA | 86..337 | 32..285 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:24 Download gff for
BO24568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42246-RA | 86..337 | 32..285 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:03 Download gff for
BO24568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42246-RA | 86..337 | 32..285 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:03 Download gff for
BO24568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7411506..7411714 | 77..285 | 99 | <- | Minus |
| X | 7411777..7411821 | 32..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:24 Download gff for
BO24568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7305539..7305747 | 77..285 | 99 | <- | Minus |
| arm_X | 7305810..7305854 | 32..76 | 100 | | Minus |
BO24568.pep Sequence
Translation from 16 to 301
> BO24568.pep
MAFLFKLFTFLAVAAILIQMTLALEFMDEDFLANDDGHHLDEESAEVPGI
LTGYTRDTIAHFNPRKVDGGFRQLWERVPLQKVDDIKRRASFLDH
BO24568.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42246-PB | 89 | CG42246-PB | 1..89 | 1..89 | 462 | 100 | Plus |
| CG42246-PA | 89 | CG42246-PA | 1..89 | 1..89 | 462 | 100 | Plus |
