BO24575.complete Sequence
451 bp assembled on 2010-05-18
GenBank Submission: KX799298
> BO24575.complete
GAAGTTATCAGTCGACATGCCAAAAGTGGATGAGTCCCCCATCTTCCGGC
GCAAGCATATAATCAGCGAGGAGCGTTCCGTATCTGTGGATCGCTTCAAG
TACACGCTAAACGATGAGGGAGGCTTCACCAGGTCCGTTCCGCTGGTTCA
GGAGTATCACTACAGGGTGGTATCTCCTTTGGCCAGCCGACCCAGTCAGC
AGCATCCGCATAAGCCGGGATCCGGAGAAGCCCGTTTCGAGCCTCGTCTT
AACCGTCGCTCCTCGGTTCCGATCAGCATTAACTATCAAACGGTGCACGT
ATCGAGTCCACATCCTCCGGAAATGGCCAGGCGCGGCTCGGTGATAAGCC
TCACTGGGCCACCACCAGAAGTCAGTGGTATGCCAAGTGGAGCCGCTGAT
CCAAAGCGGCGCGTCCGCATGATAAATCGCCATGCAAGCTTTCTAGACCA
T
BO24575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-RB | 420 | CG34219-PB | 1..417 | 17..433 | 2085 | 100 | Plus |
| CG34219-RA | 420 | CG34219-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-RB | 643 | CG34219-RB | 63..480 | 16..433 | 2090 | 100 | Plus |
| CG34219-RA | 1111 | CG34219-RA | 63..480 | 16..433 | 2090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8918592..8918815 | 239..16 | 1120 | 100 | Minus |
| 2R | 25286936 | 2R | 8918339..8918533 | 433..239 | 975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:47:30 has no hits.
BO24575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:35 Download gff for
BO24575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 156..572 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:26 Download gff for
BO24575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 64..480 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:06 Download gff for
BO24575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 64..480 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:06 Download gff for
BO24575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8918336..8918532 | 240..435 | 98 | <- | Minus |
| 2R | 8918592..8918814 | 17..239 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:26 Download gff for
BO24575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4805841..4806037 | 240..435 | 98 | <- | Minus |
| arm_2R | 4806097..4806319 | 17..239 | 100 | | Minus |
BO24575.pep Sequence
Translation from 16 to 451
> BO24575.pep
MPKVDESPIFRRKHIISEERSVSVDRFKYTLNDEGGFTRSVPLVQEYHYR
VVSPLASRPSQQHPHKPGSGEARFEPRLNRRSSVPISINYQTVHVSSPHP
PEMARRGSVISLTGPPPEVSGMPSGAADPKRRVRMINRHASFLDH
BO24575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-PB | 139 | CG34219-PB | 1..139 | 1..139 | 730 | 100 | Plus |
| CG34219-PA | 139 | CG34219-PA | 1..139 | 1..139 | 730 | 100 | Plus |
