BO24577.complete Sequence
685 bp assembled on 2010-05-18
GenBank Submission: KX794836
> BO24577.complete
GAAGTTATCAGTCGACATGACCAAAGCGAATAAAACGCCGCAAAAAGCAA
GTGAACCGAATATAAATGGTTCCTTCACACCAGTTCGATATTTGGACAGC
CAGCGCCTGCAATCGCCCACGAGTCACGATGCGAATTTAGCCACCTGCAA
AACCAGATTGGAAACAATAGTCAAACAACTCCAGGATAACTACGCTAAAT
GGCAGCTGGCCCATCAGCGGGGCACCTCTATTTGCTATACTATCGAAGCC
AAGAAGACCAAGTGTCTGGAGAAAAGCCAGGATGAAGGCAGCTCCCTTTA
CCCAGATGATCTCCTACTTCCCTGCAACAAGTTGGCCATCATAGCCTCTA
TTTTCGGGGATATCGCAAATAATACAAAGGAGATACTAAGACAACTGAGA
GGCATATTAAAATTACCGGGATCTGCAGCGGATACGATATTCTACAGGTC
CTGGAAGTTGCAGCAATTCGTGGTTTTCGCGAAGGAGCTATCCGAAAGAT
ATGAGAAGGAGGCTCTGGTCAAAATGGAAGTTGCCGGTAACATTGCTCAC
TCGACTGAAAGAAGCCAGCTCATTGCGCACACAACTTTATGGGAATTTCC
CGAGCACGTGGACTCCTATGTCCATCTGGGGTTTCTTCTCCTTGCCGAAG
AAGTCAGTTTAAGGCAAGCAAGCTTTCTAGACCAT
BO24577.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34174-RA | 654 | CG34174-PA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34174-RA | 720 | CG34174-RA | 47..697 | 17..667 | 3255 | 100 | Plus |
| CG10880-RB | 1282 | CG10880-RB | 1110..1241 | 667..536 | 660 | 100 | Minus |
| CG10880-RA | 1285 | CG10880-RA | 1113..1244 | 667..536 | 660 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2214438..2214887 | 90..539 | 2250 | 100 | Plus |
| 2L | 23513712 | 2L | 2215013..2215144 | 536..667 | 660 | 100 | Plus |
| 2L | 23513712 | 2L | 2214312..2214384 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:47:36 has no hits.
BO24577.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:36 Download gff for
BO24577.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34174-RA | 1..651 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:28 Download gff for
BO24577.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34174-RA | 47..697 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:07 Download gff for
BO24577.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34174-RA | 47..697 | 17..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:07 Download gff for
BO24577.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2214312..2214384 | 17..89 | 100 | -> | Plus |
| 2L | 2214438..2214884 | 90..536 | 100 | -> | Plus |
| 2L | 2215014..2215144 | 537..669 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:28 Download gff for
BO24577.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2214312..2214384 | 17..89 | 100 | -> | Plus |
| arm_2L | 2214438..2214884 | 90..536 | 100 | -> | Plus |
| arm_2L | 2215014..2215144 | 537..669 | 98 | | Plus |
BO24577.pep Sequence
Translation from 16 to 685
> BO24577.pep
MTKANKTPQKASEPNINGSFTPVRYLDSQRLQSPTSHDANLATCKTRLET
IVKQLQDNYAKWQLAHQRGTSICYTIEAKKTKCLEKSQDEGSSLYPDDLL
LPCNKLAIIASIFGDIANNTKEILRQLRGILKLPGSAADTIFYRSWKLQQ
FVVFAKELSERYEKEALVKMEVAGNIAHSTERSQLIAHTTLWEFPEHVDS
YVHLGFLLLAEEVSLRQASFLDH
BO24577.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34174-PA | 217 | CG34174-PA | 1..217 | 1..217 | 1117 | 100 | Plus |
