BO24579.complete Sequence
451 bp assembled on 2010-05-18
GenBank Submission: KX797441
> BO24579.complete
GAAGTTATCAGTCGACATGAATATTTTGACAAAAGTAAAATACAGCTGCA
GGGTGAGCTCGGTTTTAAACAGAGATGTGAAGCAGCACGGAAAGCAATTC
ATGTTTGATACGCGGGAAGAAACTTCTTGGAATTCAGATGAGGGAACCCC
CCAATTCATTACCATTAGCTTGGAGGAGCCACAGAAAGTAGCTGGATTTA
GTTTCCAGTTCCAAGGCGGATTCTCTGGCCAAAAATCCGAACTGATCATG
TACTCCGCTGACGGAGCCCAAGTTCACCAAGAGCCATTCTACCCAGAAGA
TATCAACTCCCCACAGCTTTTTCAGATTGCGGAATCAGTCCGGGAAAACC
CCTGCTCAAAGCTAAAGTTCGTCTTCGAGTCCAGCACCGATCTATTTGGT
AGAATCATTGTTTACGATCTCCAGCTGTTCGGCGCAAGCTTTCTAGACCA
T
BO24579.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34213-RA | 420 | CG34213-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34213-RA | 518 | CG34213-RA | 54..470 | 17..433 | 2085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23967172..23967464 | 433..141 | 1465 | 100 | Minus |
| 2R | 25286936 | 2R | 23967515..23967611 | 143..47 | 485 | 100 | Minus |
| 2R | 25286936 | 2R | 23967657..23967692 | 52..17 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:47:42 has no hits.
BO24579.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:37 Download gff for
BO24579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34213-RA | 22..438 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:30 Download gff for
BO24579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34213-RA | 54..470 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:09 Download gff for
BO24579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34213-RA | 54..470 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:09 Download gff for
BO24579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23967170..23967462 | 143..435 | 99 | <- | Minus |
| 2R | 23967516..23967606 | 52..142 | 100 | <- | Minus |
| 2R | 23967658..23967692 | 17..51 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:30 Download gff for
BO24579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19854693..19854985 | 143..435 | 99 | <- | Minus |
| arm_2R | 19855039..19855129 | 52..142 | 100 | <- | Minus |
| arm_2R | 19855181..19855215 | 17..51 | 100 | | Minus |
BO24579.pep Sequence
Translation from 16 to 451
> BO24579.pep
MNILTKVKYSCRVSSVLNRDVKQHGKQFMFDTREETSWNSDEGTPQFITI
SLEEPQKVAGFSFQFQGGFSGQKSELIMYSADGAQVHQEPFYPEDINSPQ
LFQIAESVRENPCSKLKFVFESSTDLFGRIIVYDLQLFGASFLDH
BO24579.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34213-PA | 139 | CG34213-PA | 1..139 | 1..139 | 724 | 100 | Plus |
