BO24581.complete Sequence
406 bp assembled on 2010-05-18
> BO24581.complete
GAAGTTATCAGTCGACATGAGACGATGCAAGACAATTCAAATGCTGTTCC
TCTGTTTGATGATGAGAATGCGAGAAAGTCATGAGCGGCCCACGCCGAAA
AATCTGCTGGAACAAATGCTGCCTGCTGACACCTTTGACGTTATCCGGAG
AATACCTCGCTCCGATGAACCCGGTCCGGATGCCAAAGGGGACCTGAAGC
TGTTGCATGCTCCCTGCGAGTTTGACTTGATAAGATACACATCGATTAAC
CACTATCCCATTTATTGCCTGCCCGTCTACACAAATCGGCACGTGAACGA
GGACTGGTATCGACTTTATAGGACCTACGACACCGAGGGATTTGTTTTCG
GGCAGTTTTACGAGCGTCTCCAGCGGTACGAGTTGGACGCAAGCTTTCTA
GACCAT
BO24581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34234-RA | 351 | CG34234-PA | 1..348 | 41..388 | 1740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34234-RA | 603 | CG34234-RA | 11..383 | 16..388 | 1865 | 100 | Plus |
| Dh44-R2-RB | 3069 | CG12370-RB | 2022..2349 | 388..61 | 1640 | 100 | Minus |
| Dh44-R2-RB | 3069 | CG12370-RB | 2406..2451 | 61..16 | 230 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12486939..12487266 | 388..61 | 1640 | 100 | Minus |
| 2R | 25286936 | 2R | 12487323..12487368 | 61..16 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:47:47 has no hits.
BO24581.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:38 Download gff for
BO24581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34234-RA | 1..348 | 41..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:32 Download gff for
BO24581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34234-RA | 12..383 | 17..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:11 Download gff for
BO24581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34234-RA | 12..383 | 17..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:11 Download gff for
BO24581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12486936..12487265 | 62..390 | 99 | <- | Minus |
| 2R | 12487323..12487367 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:32 Download gff for
BO24581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8374441..8374770 | 62..390 | 99 | <- | Minus |
| arm_2R | 8374828..8374872 | 17..61 | 100 | | Minus |
BO24581.pep Sequence
Translation from 16 to 406
> BO24581.pep
MRRCKTIQMLFLCLMMRMRESHERPTPKNLLEQMLPADTFDVIRRIPRSD
EPGPDAKGDLKLLHAPCEFDLIRYTSINHYPIYCLPVYTNRHVNEDWYRL
YRTYDTEGFVFGQFYERLQRYELDASFLDH
BO24581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:59:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34234-PA | 116 | CG34234-PA | 1..116 | 9..124 | 640 | 100 | Plus |
| CG30270-PD | 78 | CG30270-PD | 4..76 | 59..130 | 177 | 43.8 | Plus |
| CG30270-PC | 78 | CG30270-PC | 4..76 | 59..130 | 177 | 43.8 | Plus |
