BO24592.complete Sequence
739 bp assembled on 2010-05-18
GenBank Submission: KX795211
> BO24592.complete
GAAGTTATCAGTCGACATGGATCCAGTTCAACGGGAAAAGGAATTAATTA
AAATGGAATTGCCAAGGACGAGGGTGCTTGTAACCACCAGCAGAGCGGAT
TATGTGGATCATACTGAAAGAGCCGTTTACAATCCCCCGATTAAGAAAAC
CCAAGAGGATCCCTCTCTAATAAGTGGTCACTACTGCGCAAATCTAAAGG
TTGGTGGCATTGAATATAAAACAAAGACATGGCCCCAATCAATGGACTGG
CGGGAGGACTACGCACAGTTCATCAAGCGCAACAAGTGGTGTAACGAAAG
GATCTACAAGCTATTTTTTATGTATCCGCCTGTGGATTTCCGAATTCTGA
AGGACTTTGTGAAGGACCTTCGTAGATCGGTGTACATGAACGATTACTCT
CGGAATGACTTCGTTTCTTTTGTAAGTCGACGGCGCTATAGGAACAAAAA
AGGTTACTCTCTCAAGGACGAGGACTATCGGACCACATATGGGTGCTATT
ACAATTTCCTGCAGGAAACGGAGCCGTTTAGGAGCTCCTTCTATCCAGAA
CGTAGGCTAAAGGACACTACTCTGGACAAAATCGCCAGCGATTTACGAAA
AATTTTCACAAAGTACAACTTGACCACCTATTTTGATACCATATGCGTTC
CGGCCTTGATGAAAGCTAAAAATAATGTAATGCCCTCCACACCCATCGAC
CGGTATCAATTTCGCAAATATGCAAGCTTTCTAGACCAT
BO24592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34287-RA | 708 | CG34287-PA | 1..705 | 17..721 | 3525 | 100 | Plus |
CG14676-RA | 735 | CG14676-PA | 234..320 | 226..312 | 270 | 87.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34287-RA | 951 | CG34287-RA | 65..769 | 17..721 | 3525 | 100 | Plus |
CG14676-RA | 958 | CG14676-RA | 312..398 | 226..312 | 270 | 87.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5853396..5854100 | 17..721 | 3525 | 100 | Plus |
3R | 32079331 | 3R | 5847531..5847617 | 226..312 | 270 | 87.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:29 has no hits.
BO24592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:13 Download gff for
BO24592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34287-RA | 1..705 | 17..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:06 Download gff for
BO24592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34287-RA | 65..769 | 17..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:45 Download gff for
BO24592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34287-RA | 65..769 | 17..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:45 Download gff for
BO24592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5853396..5854100 | 17..723 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:06 Download gff for
BO24592.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1679118..1679822 | 17..723 | 99 | | Plus |
BO24592.pep Sequence
Translation from 16 to 739
> BO24592.pep
MDPVQREKELIKMELPRTRVLVTTSRADYVDHTERAVYNPPIKKTQEDPS
LISGHYCANLKVGGIEYKTKTWPQSMDWREDYAQFIKRNKWCNERIYKLF
FMYPPVDFRILKDFVKDLRRSVYMNDYSRNDFVSFVSRRRYRNKKGYSLK
DEDYRTTYGCYYNFLQETEPFRSSFYPERRLKDTTLDKIASDLRKIFTKY
NLTTYFDTICVPALMKAKNNVMPSTPIDRYQFRKYASFLDH
BO24592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34287-PA | 235 | CG34287-PA | 1..235 | 1..235 | 1269 | 100 | Plus |
CG14676-PA | 244 | CG14676-PA | 7..244 | 2..235 | 619 | 50.6 | Plus |