Clone BO24592 Report

Search the DGRC for BO24592

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:245
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG34287-RA
Protein status:BO24592.pep: Imported from assembly
Sequenced Size:739

Clone Sequence Records

BO24592.complete Sequence

739 bp assembled on 2010-05-18

GenBank Submission: KX795211

> BO24592.complete
GAAGTTATCAGTCGACATGGATCCAGTTCAACGGGAAAAGGAATTAATTA
AAATGGAATTGCCAAGGACGAGGGTGCTTGTAACCACCAGCAGAGCGGAT
TATGTGGATCATACTGAAAGAGCCGTTTACAATCCCCCGATTAAGAAAAC
CCAAGAGGATCCCTCTCTAATAAGTGGTCACTACTGCGCAAATCTAAAGG
TTGGTGGCATTGAATATAAAACAAAGACATGGCCCCAATCAATGGACTGG
CGGGAGGACTACGCACAGTTCATCAAGCGCAACAAGTGGTGTAACGAAAG
GATCTACAAGCTATTTTTTATGTATCCGCCTGTGGATTTCCGAATTCTGA
AGGACTTTGTGAAGGACCTTCGTAGATCGGTGTACATGAACGATTACTCT
CGGAATGACTTCGTTTCTTTTGTAAGTCGACGGCGCTATAGGAACAAAAA
AGGTTACTCTCTCAAGGACGAGGACTATCGGACCACATATGGGTGCTATT
ACAATTTCCTGCAGGAAACGGAGCCGTTTAGGAGCTCCTTCTATCCAGAA
CGTAGGCTAAAGGACACTACTCTGGACAAAATCGCCAGCGATTTACGAAA
AATTTTCACAAAGTACAACTTGACCACCTATTTTGATACCATATGCGTTC
CGGCCTTGATGAAAGCTAAAAATAATGTAATGCCCTCCACACCCATCGAC
CGGTATCAATTTCGCAAATATGCAAGCTTTCTAGACCAT

BO24592.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34287-RA 708 CG34287-PA 1..705 17..721 3525 100 Plus
CG14676-RA 735 CG14676-PA 234..320 226..312 270 87.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34287-RA 951 CG34287-RA 65..769 17..721 3525 100 Plus
CG14676-RA 958 CG14676-RA 312..398 226..312 270 87.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5853396..5854100 17..721 3525 100 Plus
3R 32079331 3R 5847531..5847617 226..312 270 87.4 Plus
Blast to na_te.dros performed on 2014-11-28 02:46:29 has no hits.

BO24592.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-18 11:29:13 Download gff for BO24592.complete
Subject Subject Range Query Range Percent Splice Strand
CG34287-RA 1..705 17..723 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:06 Download gff for BO24592.complete
Subject Subject Range Query Range Percent Splice Strand
CG34287-RA 65..769 17..723 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:45 Download gff for BO24592.complete
Subject Subject Range Query Range Percent Splice Strand
CG34287-RA 65..769 17..723 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:45 Download gff for BO24592.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5853396..5854100 17..723 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:06 Download gff for BO24592.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1679118..1679822 17..723 99   Plus

BO24592.pep Sequence

Translation from 16 to 739

> BO24592.pep
MDPVQREKELIKMELPRTRVLVTTSRADYVDHTERAVYNPPIKKTQEDPS
LISGHYCANLKVGGIEYKTKTWPQSMDWREDYAQFIKRNKWCNERIYKLF
FMYPPVDFRILKDFVKDLRRSVYMNDYSRNDFVSFVSRRRYRNKKGYSLK
DEDYRTTYGCYYNFLQETEPFRSSFYPERRLKDTTLDKIASDLRKIFTKY
NLTTYFDTICVPALMKAKNNVMPSTPIDRYQFRKYASFLDH

BO24592.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG34287-PA 235 CG34287-PA 1..235 1..235 1269 100 Plus
CG14676-PA 244 CG14676-PA 7..244 2..235 619 50.6 Plus