Clone BO24630 Report

Search the DGRC for BO24630

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:246
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG34199-RA
Protein status:BO24630.pep: Imported from assembly
Sequenced Size:610

Clone Sequence Records

BO24630.complete Sequence

610 bp assembled on 2010-05-21

GenBank Submission: KX795646

> BO24630.complete
GAAGTTATCAGTCGACATGGTGACAAAGTTGCTTCTACTGCTGCCATTTG
TGGCCATTGTACAAGCTGAAGTGGATTTTACCGGTGGACGTATAGCACCT
TATGCACCAACTGGTTGGCATCCGCAGATTCCATTCAACTTACCCAACGA
GTATGTGCCTGCTATCCGATCAAGTCAGGGAGTAGAAATCACAAAGGCAC
GAGTGGACCAGTTCGATCCAGTGGAAAAGCCCCAGCCAAATTATTTGCCT
CCAAATCAACTGGATATACCCGAGGAAGAGATTTTGCCCACCTCACGACC
GTCCAACAAGTACGGTCCGGCAGATCCGAAATTTAAAATCATTTATCCTG
ATGATGAGGAGCCAGTTACTGCAAAAAATATCGTAGACAATCAGCAGCCC
AAAATCAGAGAGGGACGTTACTTCGTCATTTCGCAGGACAATAAACTACA
AAGAGTTTCTTTCAGCTCCCAGCAAAACGCAGATGCAGATGCAGATGATT
TTACGGCTCAGTTGACTTACTCCACTGTGGGGCAACTCAAGGATCCTGTG
TATCGATACAACAGACAGGGACAACTGGAGCGGGTCCTGAAGGCAAGCTT
TCTAGACCAT

BO24630.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG34199-RA 579 CG34199-PA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG34199-RA 694 CG34199-RA 32..607 17..592 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20287692..20288259 25..592 2840 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:48:12 has no hits.

BO24630.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-21 14:40:41 Download gff for BO24630.complete
Subject Subject Range Query Range Percent Splice Strand
CG34199-RA 13..588 17..594 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:42 Download gff for BO24630.complete
Subject Subject Range Query Range Percent Splice Strand
CG34199-RA 32..607 17..594 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:20 Download gff for BO24630.complete
Subject Subject Range Query Range Percent Splice Strand
CG34199-RA 32..607 17..594 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:20 Download gff for BO24630.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20287692..20288259 25..594 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:42 Download gff for BO24630.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16175197..16175764 25..594 99   Plus

BO24630.pep Sequence

Translation from 16 to 610

> BO24630.pep
MVTKLLLLLPFVAIVQAEVDFTGGRIAPYAPTGWHPQIPFNLPNEYVPAI
RSSQGVEITKARVDQFDPVEKPQPNYLPPNQLDIPEEEILPTSRPSNKYG
PADPKFKIIYPDDEEPVTAKNIVDNQQPKIREGRYFVISQDNKLQRVSFS
SQQNADADADDFTAQLTYSTVGQLKDPVYRYNRQGQLERVLKASFLDH

BO24630.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG34199-PA 192 CG34199-PA 1..192 1..192 1007 100 Plus