BO24665.complete Sequence
289 bp assembled on 2010-05-21
GenBank Submission: KX793902
> BO24665.complete
GAAGTTATCAGTCGACATGGGTCACCTGCAGTTGGATTTCCATTCCATAC
CTAAGCTCCATGGCAGGGAGAACTATTGGCAGTGGCGCATCCTCCTGAAG
ACCTTTCTGGAGGCCAACGATCTGTGGAAGCACAACGAACCGAAGGAGAG
CCCAGAAACCAAATTCCTGATTTTGGCCAGCGTTACGGCCGATAAGATTG
AGCCATCCTACGATGATCAAAGCTGTTCGTACATTTTCCAAAACATGGAG
AGTCGATTCGGGCCTTTTAGTGCAAGCTTTCTAGACCAT
BO24665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:49:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34301-RA | 258 | CG34301-PA | 1..255 | 17..271 | 1275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34301-RA | 307 | CG34301-RA | 6..264 | 13..271 | 1280 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8773440..8773575 | 13..148 | 665 | 99.3 | Plus |
3R | 32079331 | 3R | 8773643..8773767 | 147..271 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:49:48 has no hits.
BO24665.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-21 14:40:46 Download gff for
BO24665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34301-RA | 10..264 | 17..273 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:19 Download gff for
BO24665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34301-RA | 10..264 | 17..273 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:52 Download gff for
BO24665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34301-RA | 10..264 | 17..273 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:52 Download gff for
BO24665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8773444..8773575 | 17..148 | 100 | -> | Plus |
3R | 8773645..8773767 | 149..273 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:19 Download gff for
BO24665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4599166..4599297 | 17..148 | 100 | -> | Plus |
arm_3R | 4599367..4599489 | 149..273 | 98 | | Plus |
BO24665.pep Sequence
Translation from 16 to 289
> BO24665.pep
MGHLQLDFHSIPKLHGRENYWQWRILLKTFLEANDLWKHNEPKESPETKF
LILASVTADKIEPSYDDQSCSYIFQNMESRFGPFSASFLDH
BO24665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:59:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34301-PA | 85 | CG34301-PA | 1..85 | 1..85 | 467 | 100 | Plus |
CG42446-PA | 123 | CG42446-PA | 39..109 | 11..81 | 169 | 42.3 | Plus |