Clone BO24666 Report

Search the DGRC for BO24666

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:246
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG34308-RA
Protein status:BO24666.pep: Imported from assembly
Sequenced Size:358

Clone Sequence Records

BO24666.complete Sequence

358 bp assembled on 2010-05-21

GenBank Submission: KX798581

> BO24666.complete
GAAGTTATCAGTCGACATGCCACAAATAATGAATTCTAAGGACAAACGAA
ACCCAAATTATTCCGGCGGGAACAGCGGCGAGGAAGAGGATTCCTGGATG
AACAGCTATTACACCTGCCTGGTGTGCATGCAGACTGCTGAATCGCCGAG
GGTCAGTTTTTGCGGCCACCACTTCTGCTCCCAGTGCATATACAACTGGA
TTAGGAGTCAGAAATATCAGGCCAAATGCCCCTACTGCCAGTCCCTGATC
GGTGAGAACACCCTCATCACTATCACCATGCGAAGACGAAGAACGTACTT
TCGTGCAAATCCTTTGTGGAGCACCGCCGCCAGATGCGCAGCAAGCTTTC
TAGACCAT

BO24666.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:49:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-RB 216 CG34308-PB 1..213 128..340 1065 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-RB 840 CG34308-RB 88..412 16..340 1625 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13089329..13089653 16..340 1625 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:49:42 has no hits.

BO24666.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-21 14:40:45 Download gff for BO24666.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 32..355 17..342 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:17 Download gff for BO24666.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 32..355 17..342 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:50 Download gff for BO24666.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RB 89..412 17..342 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:50 Download gff for BO24666.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13089330..13089653 17..342 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:17 Download gff for BO24666.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8915052..8915375 17..342 99   Plus

BO24666.pep Sequence

Translation from 16 to 358

> BO24666.pep
MPQIMNSKDKRNPNYSGGNSGEEEDSWMNSYYTCLVCMQTAESPRVSFCG
HHFCSQCIYNWIRSQKYQAKCPYCQSLIGENTLITITMRRRRTYFRANPL
WSTAARCAASFLDH

BO24666.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-PB 71 CG34308-PB 1..71 38..108 398 100 Plus
CG32847-PB 164 CG32847-PB 9..97 25..105 148 33.7 Plus