BO24689.complete Sequence
385 bp assembled on 2010-05-24
GenBank Submission: KX796895
> BO24689.complete
GAAGTTATCAGTCGACATGGCGCGTTCCCAGTCGAAAATGATTCGGGCCG
CCATGGTCGTGGACGACCCTAATATGGTGGCCTGGCTGCCATACCTTAAC
TTTCTTCGCTTTCTGAAGCGAAACTTCTATCCCAGGACTGATTTGCGCCG
CTTACTTCAGGTGGGACTCATCCGTTGGATCGCACTTAGCGATGCCCAGA
AGAGGTTATTTGAGCCAGAACGAATCCTGGCGCGTGTGGCTCGCAGGCAA
AGGAATAAACGACGCCGCCGACTACTTCGCCGTGCTCGGCATGGCCAGAA
AGGACGTGGTGCAGTGCGACGCCCCATCTACGACAGCCGTCCTAAACCGA
GACGCCGCAAACCGAAGGCAAGCTTTCTAGACCAT
BO24689.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:39:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34264-RC | 354 | CG34264-PC | 1..351 | 17..367 | 1740 | 99.7 | Plus |
CG34264-RB | 354 | CG34264-PB | 1..351 | 17..367 | 1740 | 99.7 | Plus |
CG34264-RD | 345 | CG34264-PD | 1..335 | 17..367 | 1465 | 95.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:40:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34264-RC | 563 | CG34264-RC | 125..475 | 17..367 | 1740 | 99.7 | Plus |
CG34264-RB | 587 | CG34264-RB | 122..472 | 17..367 | 1740 | 99.7 | Plus |
CG34264-RD | 547 | CG34264-RD | 125..459 | 17..367 | 1465 | 95.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:39:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 317208..317411 | 17..220 | 1020 | 100 | Plus |
3L | 28110227 | 3L | 317465..317611 | 221..367 | 720 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:39:56 has no hits.
BO24689.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-24 10:02:27 Download gff for
BO24689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34264-RB | 122..472 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:17 Download gff for
BO24689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34264-RB | 122..472 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:46 Download gff for
BO24689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34264-RB | 122..472 | 17..369 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:46 Download gff for
BO24689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 317208..317411 | 17..220 | 100 | -> | Plus |
3L | 317465..317611 | 221..369 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:17 Download gff for
BO24689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 317208..317411 | 17..220 | 100 | -> | Plus |
arm_3L | 317465..317611 | 221..369 | 97 | | Plus |
BO24689.pep Sequence
Translation from 16 to 385
> BO24689.pep
MARSQSKMIRAAMVVDDPNMVAWLPYLNFLRFLKRNFYPRTDLRRLLQVG
LIRWIALSDAQKRLFEPERILARVARRQRNKRRRRLLRRARHGQKGRGAV
RRPIYDSRPKPRRRKPKASFLDH
BO24689.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34264-PC | 117 | CG34264-PC | 1..117 | 1..117 | 601 | 100 | Plus |
CG34264-PB | 117 | CG34264-PB | 1..117 | 1..117 | 601 | 100 | Plus |
CG34264-PD | 114 | CG34264-PD | 1..62 | 1..62 | 318 | 100 | Plus |