Clone BO24691 Report

Search the DGRC for BO24691

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:246
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG34274-RA
Protein status:BO24691.pep: Imported from assembly
Sequenced Size:784

Clone Sequence Records

BO24691.complete Sequence

784 bp assembled on 2010-07-02

GenBank Submission: KX795353

> BO24691.complete
GAAGTTATCAGTCGACATGCCCTTAACCACCAATACAGTGGACAAAAAAA
ATGAACACGAAAAACCATTTGGCTTAGAAATACCCAAACCAGAGCTATTT
ATATATCAGCACCCCGCAGCCGATGAGTCCTTTCTTAAAGAACAACCTAC
CAAGGTCGAAGATGTGATCGAGTACCTGGATGTGCTTGAAAACGCCAACA
AGACCGATTCGTCAAAAAAAAGACAAAAATCTACGATTACCATGGATGAC
ATAAAATGTATTGTGACACGGCGAAGTGCTGTAAGCACGACAACATTTCG
TCGAGGCAAAGCAAAAAGAGCCTTAATTAACACGAATCAATTCACGTTTA
TGCGTCAGATTGATTCGGAACCCGATGATCGTGTTTTGGCCAGAGAACAG
CGTGAAGATGTGGCCGAAACATTTCGTCGGATGGGAAATTACGAGTATCG
TAAACTAAACTTCAGTTTAGCCAAAGACTACTATTCAAAGGGTATACAAT
ACATAAAAGACTCGCCTGTCCTATACGTAAATCGAGCCCTTTGCTTTATC
AAGTTACGCGAATTTAAGCTAGGTATCATAGATTGTGATTATGTGTTGGC
CAAAATTGACGAACATTATCTGCGTGCTTGGCTTTATAGGGCAGCTGCCT
ATAAGCGTCTGAATGATGAGCCAAACTTTGAATATAGTGTTGATCGCGCC
AGACGATTTAACAGATCGGATGCTGACTTTATAGATGAATTCCTGGACAA
AATGAGATCGCTTCTCGCAAGCTTTCTAGACCAT

BO24691.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG34274-RA 753 CG34274-PA 1..750 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG34274-RA 839 CG34274-RA 42..791 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15732036..15732382 208..554 1735 100 Plus
3R 32079331 3R 15732433..15732646 553..766 1070 100 Plus
3R 32079331 3R 15731787..15731977 17..207 955 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:22:03 has no hits.

BO24691.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:25:02 Download gff for BO24691.complete
Subject Subject Range Query Range Percent Splice Strand
CG34274-RA 1..750 17..768 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:38 Download gff for BO24691.complete
Subject Subject Range Query Range Percent Splice Strand
CG34274-RA 42..791 17..768 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:43 Download gff for BO24691.complete
Subject Subject Range Query Range Percent Splice Strand
CG34274-RA 42..791 17..768 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:43 Download gff for BO24691.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15731787..15731977 17..207 100 -> Plus
3R 15732036..15732380 208..552 100 -> Plus
3R 15732433..15732646 553..768 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:38 Download gff for BO24691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11557509..11557699 17..207 100 -> Plus
arm_3R 11557758..11558102 208..552 100 -> Plus
arm_3R 11558155..11558368 553..768 99   Plus

BO24691.pep Sequence

Translation from 16 to 784

> BO24691.pep
MPLTTNTVDKKNEHEKPFGLEIPKPELFIYQHPAADESFLKEQPTKVEDV
IEYLDVLENANKTDSSKKRQKSTITMDDIKCIVTRRSAVSTTTFRRGKAK
RALINTNQFTFMRQIDSEPDDRVLAREQREDVAETFRRMGNYEYRKLNFS
LAKDYYSKGIQYIKDSPVLYVNRALCFIKLREFKLGIIDCDYVLAKIDEH
YLRAWLYRAAAYKRLNDEPNFEYSVDRARRFNRSDADFIDEFLDKMRSLL
ASFLDH

BO24691.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG34274-PA 250 CG34274-PA 1..250 1..250 1296 100 Plus
CG34297-PA 233 CG34297-PA 1..233 27..247 486 44.4 Plus
CG31294-PA 225 CG31294-PA 3..223 35..248 449 44.6 Plus
CG6980-PA 250 CG6980-PA 59..243 64..248 308 35.1 Plus
Hop-PA 490 CG2720-PA 310..418 133..242 154 28.2 Plus