BO24691.complete Sequence
784 bp assembled on 2010-07-02
GenBank Submission: KX795353
> BO24691.complete
GAAGTTATCAGTCGACATGCCCTTAACCACCAATACAGTGGACAAAAAAA
ATGAACACGAAAAACCATTTGGCTTAGAAATACCCAAACCAGAGCTATTT
ATATATCAGCACCCCGCAGCCGATGAGTCCTTTCTTAAAGAACAACCTAC
CAAGGTCGAAGATGTGATCGAGTACCTGGATGTGCTTGAAAACGCCAACA
AGACCGATTCGTCAAAAAAAAGACAAAAATCTACGATTACCATGGATGAC
ATAAAATGTATTGTGACACGGCGAAGTGCTGTAAGCACGACAACATTTCG
TCGAGGCAAAGCAAAAAGAGCCTTAATTAACACGAATCAATTCACGTTTA
TGCGTCAGATTGATTCGGAACCCGATGATCGTGTTTTGGCCAGAGAACAG
CGTGAAGATGTGGCCGAAACATTTCGTCGGATGGGAAATTACGAGTATCG
TAAACTAAACTTCAGTTTAGCCAAAGACTACTATTCAAAGGGTATACAAT
ACATAAAAGACTCGCCTGTCCTATACGTAAATCGAGCCCTTTGCTTTATC
AAGTTACGCGAATTTAAGCTAGGTATCATAGATTGTGATTATGTGTTGGC
CAAAATTGACGAACATTATCTGCGTGCTTGGCTTTATAGGGCAGCTGCCT
ATAAGCGTCTGAATGATGAGCCAAACTTTGAATATAGTGTTGATCGCGCC
AGACGATTTAACAGATCGGATGCTGACTTTATAGATGAATTCCTGGACAA
AATGAGATCGCTTCTCGCAAGCTTTCTAGACCAT
BO24691.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34274-RA | 753 | CG34274-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34274-RA | 839 | CG34274-RA | 42..791 | 17..766 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15732036..15732382 | 208..554 | 1735 | 100 | Plus |
3R | 32079331 | 3R | 15732433..15732646 | 553..766 | 1070 | 100 | Plus |
3R | 32079331 | 3R | 15731787..15731977 | 17..207 | 955 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:22:03 has no hits.
BO24691.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:25:02 Download gff for
BO24691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34274-RA | 1..750 | 17..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:38 Download gff for
BO24691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34274-RA | 42..791 | 17..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:43 Download gff for
BO24691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34274-RA | 42..791 | 17..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:43 Download gff for
BO24691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15731787..15731977 | 17..207 | 100 | -> | Plus |
3R | 15732036..15732380 | 208..552 | 100 | -> | Plus |
3R | 15732433..15732646 | 553..768 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:38 Download gff for
BO24691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11557509..11557699 | 17..207 | 100 | -> | Plus |
arm_3R | 11557758..11558102 | 208..552 | 100 | -> | Plus |
arm_3R | 11558155..11558368 | 553..768 | 99 | | Plus |
BO24691.pep Sequence
Translation from 16 to 784
> BO24691.pep
MPLTTNTVDKKNEHEKPFGLEIPKPELFIYQHPAADESFLKEQPTKVEDV
IEYLDVLENANKTDSSKKRQKSTITMDDIKCIVTRRSAVSTTTFRRGKAK
RALINTNQFTFMRQIDSEPDDRVLAREQREDVAETFRRMGNYEYRKLNFS
LAKDYYSKGIQYIKDSPVLYVNRALCFIKLREFKLGIIDCDYVLAKIDEH
YLRAWLYRAAAYKRLNDEPNFEYSVDRARRFNRSDADFIDEFLDKMRSLL
ASFLDH
BO24691.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34274-PA | 250 | CG34274-PA | 1..250 | 1..250 | 1296 | 100 | Plus |
CG34297-PA | 233 | CG34297-PA | 1..233 | 27..247 | 486 | 44.4 | Plus |
CG31294-PA | 225 | CG31294-PA | 3..223 | 35..248 | 449 | 44.6 | Plus |
CG6980-PA | 250 | CG6980-PA | 59..243 | 64..248 | 308 | 35.1 | Plus |
Hop-PA | 490 | CG2720-PA | 310..418 | 133..242 | 154 | 28.2 | Plus |