Clone BO24696 Report

Search the DGRC for BO24696

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:246
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG34150-RB
Protein status:BO24696.pep: Imported from assembly
Sequenced Size:445

Clone Sequence Records

BO24696.complete Sequence

445 bp assembled on 2012-04-24

GenBank Submission: KX794525

> BO24696.complete
GAAGTTATCAGTCGACATGTCCAATTTGCGGCGCCAGGTTCTCAGTGCTT
TCAAGAAGCTCCACCGTACACGACAATACGTTTTTCAGGGGGATGCCAAT
GCTTTGGCGGCGGGACGACTAAAAATCAACGAATCTTTCCTGCAGAATCG
TAATGAAAGCAGCGAGGATGAAATTCAAAAGATGATCAAGCTGGCGCAGG
ACGTGGATTTGGAGCTGCGAACGAATGTCATCCAAGCCCAGAAAAAAGAG
GATGGTGTTTATGAACTAAGGATCACGCCAGAGACAACGCGACTCGACAA
TGTGGTCTTTAATCCTGACGCAATTATCGAAAAACCGCGCAGGCAACGCG
GCGACAAAAACACTGAAGGTTGCTGCGGTGGCGCTGCGATGGCGGCGCTG
GAAGCCGAAGTCCAGGCCCGCAACAAAGCAAGCTTTCTAGACCAT

BO24696.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG34150-RB 414 CG34150-PB 1..411 17..427 2055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG34150-RB 495 CG34150-RB 16..426 17..427 2055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24814697..24814861 263..427 825 100 Plus
3R 32079331 3R 24814345..24814492 34..181 740 100 Plus
3R 32079331 3R 24814551..24814634 180..263 420 100 Plus
Blast to na_te.dros performed on 2014-11-28 07:48:04 has no hits.

BO24696.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:07:26 Download gff for BO24696.complete
Subject Subject Range Query Range Percent Splice Strand
CG34150-RA 1..240 17..256 100 == Plus
CG34150-RA 241..384 284..429 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:45 Download gff for BO24696.complete
Subject Subject Range Query Range Percent Splice Strand
CG34150-RB 16..426 17..429 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:20 Download gff for BO24696.complete
Subject Subject Range Query Range Percent Splice Strand
CG34150-RB 16..426 17..429 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:11 Download gff for BO24696.complete
Subject Subject Range Query Range Percent Splice Strand
CG34150-RB 16..426 17..429 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:11 Download gff for BO24696.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24814277..24814297 17..37 100 -> Plus
3R 24814349..24814492 38..181 100 -> Plus
3R 24814553..24814634 182..263 100 -> Plus
3R 24814698..24814861 264..429 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:20 Download gff for BO24696.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20639999..20640019 17..37 100 -> Plus
arm_3R 20640071..20640214 38..181 100 -> Plus
arm_3R 20640275..20640356 182..263 100 -> Plus
arm_3R 20640420..20640583 264..429 98   Plus

BO24696.pep Sequence

Translation from 16 to 445

> BO24696.pep
MSNLRRQVLSAFKKLHRTRQYVFQGDANALAAGRLKINESFLQNRNESSE
DEIQKMIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNP
DAIIEKPRRQRGDKNTEGCCGGAAMAALEAEVQARNKASFLDH

BO24696.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34150-PB 137 CG34150-PB 1..137 1..137 689 100 Plus