BO24696.complete Sequence
445 bp assembled on 2012-04-24
GenBank Submission: KX794525
> BO24696.complete
GAAGTTATCAGTCGACATGTCCAATTTGCGGCGCCAGGTTCTCAGTGCTT
TCAAGAAGCTCCACCGTACACGACAATACGTTTTTCAGGGGGATGCCAAT
GCTTTGGCGGCGGGACGACTAAAAATCAACGAATCTTTCCTGCAGAATCG
TAATGAAAGCAGCGAGGATGAAATTCAAAAGATGATCAAGCTGGCGCAGG
ACGTGGATTTGGAGCTGCGAACGAATGTCATCCAAGCCCAGAAAAAAGAG
GATGGTGTTTATGAACTAAGGATCACGCCAGAGACAACGCGACTCGACAA
TGTGGTCTTTAATCCTGACGCAATTATCGAAAAACCGCGCAGGCAACGCG
GCGACAAAAACACTGAAGGTTGCTGCGGTGGCGCTGCGATGGCGGCGCTG
GAAGCCGAAGTCCAGGCCCGCAACAAAGCAAGCTTTCTAGACCAT
BO24696.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:48:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-RB | 414 | CG34150-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:48:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-RB | 495 | CG34150-RB | 16..426 | 17..427 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:48:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24814697..24814861 | 263..427 | 825 | 100 | Plus |
3R | 32079331 | 3R | 24814345..24814492 | 34..181 | 740 | 100 | Plus |
3R | 32079331 | 3R | 24814551..24814634 | 180..263 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:48:04 has no hits.
BO24696.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:07:26 Download gff for
BO24696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RA | 1..240 | 17..256 | 100 | == | Plus |
CG34150-RA | 241..384 | 284..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:45 Download gff for
BO24696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..426 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:20 Download gff for
BO24696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..426 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:11 Download gff for
BO24696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..426 | 17..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:11 Download gff for
BO24696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24814277..24814297 | 17..37 | 100 | -> | Plus |
3R | 24814349..24814492 | 38..181 | 100 | -> | Plus |
3R | 24814553..24814634 | 182..263 | 100 | -> | Plus |
3R | 24814698..24814861 | 264..429 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:20 Download gff for
BO24696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20639999..20640019 | 17..37 | 100 | -> | Plus |
arm_3R | 20640071..20640214 | 38..181 | 100 | -> | Plus |
arm_3R | 20640275..20640356 | 182..263 | 100 | -> | Plus |
arm_3R | 20640420..20640583 | 264..429 | 98 | | Plus |
BO24696.pep Sequence
Translation from 16 to 445
> BO24696.pep
MSNLRRQVLSAFKKLHRTRQYVFQGDANALAAGRLKINESFLQNRNESSE
DEIQKMIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNP
DAIIEKPRRQRGDKNTEGCCGGAAMAALEAEVQARNKASFLDH
BO24696.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-PB | 137 | CG34150-PB | 1..137 | 1..137 | 689 | 100 | Plus |