Clone BO24703 Report

Search the DGRC for BO24703

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:247
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptinaF-C-RA
Protein status:BO24703.pep: Imported from assembly
Sequenced Size:454

Clone Sequence Records

BO24703.complete Sequence

454 bp assembled on 2010-05-17

GenBank Submission: KX795003

> BO24703.complete
GAAGTTATCAGTCGACATGTCCACTGCGTCAGAATCCGCCAGGGCGGGCC
TGGGCAATGCCGCCAGCATGGCGAATCTTGCCAAGATTGTCAATCTCATC
GAATCGAACGTGAAGAGCGAGGATGTGGAGGTGCTTGAGGAAGCGGTCAG
GGGATCAACCGGAACCGGAAGTGGCAGCAGCGTCCGCTTGGCCAGCAGCA
GTGCCCCGCGTAGAAGTGCCTGTGCCACATCGTATGTCCCCAAGTCACCG
CAGCTGGAGGAGATTGTGTTCGCAGAGCCCACGTATACCGAGCGATTTGC
CCGATACTTTGTGATCGTGATCTATTTGTGCGGGCTCTGCAGCCTGGGAT
TCTTTCTGTCCATCTACCACATCTTCTTCTGGGATTCACGCATGCCACCC
GTTTACAAGGGCCAGAAGAAGGGGCCTGCCTTCGGCGCAAGCTTTCTAGA
CCAT

BO24703.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
inaF-C-RA 423 CG34321-PA 1..420 17..436 2100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
inaF-C-RA 1590 CG34321-RA 120..539 17..436 2100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11731227..11731646 436..17 2100 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:34:17 has no hits.

BO24703.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:11 Download gff for BO24703.complete
Subject Subject Range Query Range Percent Splice Strand
CG34321-RA 120..539 17..438 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:33 Download gff for BO24703.complete
Subject Subject Range Query Range Percent Splice Strand
inaF-C-RA 120..539 17..438 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:54 Download gff for BO24703.complete
Subject Subject Range Query Range Percent Splice Strand
inaF-C-RA 120..539 17..438 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:54 Download gff for BO24703.complete
Subject Subject Range Query Range Percent Splice Strand
X 11731225..11731646 17..438 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:33 Download gff for BO24703.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11625258..11625679 17..438 99   Minus

BO24703.pep Sequence

Translation from 16 to 454

> BO24703.pep
MSTASESARAGLGNAASMANLAKIVNLIESNVKSEDVEVLEEAVRGSTGT
GSGSSVRLASSSAPRRSACATSYVPKSPQLEEIVFAEPTYTERFARYFVI
VIYLCGLCSLGFFLSIYHIFFWDSRMPPVYKGQKKGPAFGASFLDH

BO24703.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
inaF-C-PA 140 CG34321-PA 1..140 1..140 710 100 Plus