BO24707.complete Sequence
670 bp assembled on 2010-05-17
GenBank Submission: KX794158
> BO24707.complete
GAAGTTATCAGTCGACATGTTTTTAAACGATATAGGCCAGCCCTTAATAC
TGGAAAAAGGAAAAGTCTACAGTTCCTACGAGGAGCACCGTGGACCCTTG
CTCTTCACGTCAGCCGCCTTAGGAGATCTAATAGCACCACAAAATTGGTG
CCAGTTAGCTGTGGGTTCGCAGCTGGACATCTCACGGCTGCAATCACATG
CAGATGTTTCAGAAAGCTGCACTTTTGAAATACTACTGCCGAATAAGCCC
ACCCGACTAGTGTACGATGAAAACGAGATCACAATCACATTGATACCAGC
AGGAAGAAAGGAAAACGGCTTGGAGTGCAACCTATTCTACATAGAAAACG
GCCATGCACGATATTTAATTGTGGACTGCCTATCTGGGTATCTGGACTTT
CTGCCAAAGGCTTCGGGCTCCCTTCACACGGGCCTCTGTCAGGGAATCGA
TGTACTGTACGTGGACGAAGAGCTATTAGCTGAGAACCAAATAAACGAGG
ATCTTTACAGTTTGGTTGACCTGATAAGACCAAAGTTCATATACGGGTTG
CGGCAGTGGGAACTGCCGAAGTGGCTGCTCGATCTGCGTCAGATTGATGA
TAGAAATAAGAAGTATAGCGTGCTTTCCGTACAAAATGATGCATTTAAGG
TTGCAAGCTTTCTAGACCAT
BO24707.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34008-RA | 639 | CG34008-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34008-RA | 715 | CG34008-RA | 23..658 | 17..652 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20580740..20581044 | 652..348 | 1525 | 100 | Minus |
| 3R | 32079331 | 3R | 20581113..20581376 | 347..84 | 1320 | 100 | Minus |
| 3R | 32079331 | 3R | 20581432..20581500 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:34:28 has no hits.
BO24707.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-17 10:58:13 Download gff for
BO24707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34008-RA | 9..636 | 25..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:38 Download gff for
BO24707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34008-RA | 31..658 | 25..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:58 Download gff for
BO24707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34008-RA | 31..658 | 25..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:58 Download gff for
BO24707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20581113..20581374 | 86..347 | 100 | <- | Minus |
| 3R | 20580738..20581044 | 348..654 | 99 | <- | Minus |
| 3R | 20581432..20581492 | 25..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:38 Download gff for
BO24707.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16406835..16407096 | 86..347 | 100 | <- | Minus |
| arm_3R | 16406460..16406766 | 348..654 | 99 | <- | Minus |
| arm_3R | 16407154..16407214 | 25..85 | 100 | | Minus |
BO24707.pep Sequence
Translation from 16 to 670
> BO24707.pep
MFLNDIGQPLILEKGKVYSSYEEHRGPLLFTSAALGDLIAPQNWCQLAVG
SQLDISRLQSHADVSESCTFEILLPNKPTRLVYDENEITITLIPAGRKEN
GLECNLFYIENGHARYLIVDCLSGYLDFLPKASGSLHTGLCQGIDVLYVD
EELLAENQINEDLYSLVDLIRPKFIYGLRQWELPKWLLDLRQIDDRNKKY
SVLSVQNDAFKVASFLDH
BO24707.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:41:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34008-PA | 212 | CG34008-PA | 1..212 | 1..212 | 1110 | 100 | Plus |
